The 2.0 version of rSNPBase

Variant report

Variant rs16946016
Chromosome Location chr16:48281714-48281715
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr16:48278800-48281800 Flanking Active TSS Liver Liver
2 chr16:48279000-48287000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr16:48279400-48281800 Enhancers Primary T helper 17 cells PMA-I stimulated --
4 chr16:48279400-48312600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr16:48279600-48281800 Enhancers Primary T helper naive cells from peripheral blood blood
6 chr16:48279600-48281800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
7 chr16:48279600-48281800 Enhancers Brain Angular Gyrus brain
8 chr16:48279600-48281800 Enhancers Skeletal Muscle Male skeletal muscle
9 chr16:48279600-48283000 Enhancers Primary T helper naive cells fromperipheralblood blood
10 chr16:48279600-48283600 Enhancers Primary T helper cells PMA-I stimulated --
11 chr16:48279600-48285400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
12 chr16:48279600-48286400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr16:48279600-48286600 Weak transcription HUES6 Cell Line embryonic stem cell
14 chr16:48279600-48286600 Weak transcription Fetal Thymus thymus
15 chr16:48279600-48287400 Weak transcription Placenta Amnion Placenta Amnion
16 chr16:48279600-48292200 Weak transcription iPS-20b Cell Line embryonic stem cell
17 chr16:48279600-48292600 Weak transcription HUES48 Cell Line embryonic stem cell
18 chr16:48279600-48293400 Weak transcription iPS-18 Cell Line embryonic stem cell
19 chr16:48279600-48293400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
20 chr16:48279600-48294200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
21 chr16:48279600-48297200 Weak transcription H9 Cell Line embryonic stem cell
22 chr16:48279600-48311200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
23 chr16:48279600-48320200 Weak transcription Spleen Spleen
24 chr16:48279800-48285600 Enhancers Primary T killer naive cells fromperipheralblood blood
25 chr16:48280000-48283400 Enhancers Primary T regulatory cells fromperipheralblood blood
26 chr16:48280000-48285800 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr16:48280000-48286600 Weak transcription Primary B cells from cord blood blood
28 chr16:48280000-48287400 Weak transcription Primary neutrophils fromperipheralblood blood
29 chr16:48280000-48288000 Weak transcription Fetal Muscle Leg muscle
30 chr16:48280200-48281800 Enhancers Brain Hippocampus Middle brain
31 chr16:48280200-48285400 Enhancers Primary T helper cells fromperipheralblood blood
32 chr16:48280200-48285800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
33 chr16:48280200-48286000 Weak transcription HUES64 Cell Line embryonic stem cell
34 chr16:48280200-48286000 Weak transcription Placenta Placenta
35 chr16:48280200-48288000 Weak transcription A549 lung
36 chr16:48280400-48281800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
37 chr16:48280400-48281800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr16:48280400-48281800 Enhancers Adipose Nuclei Adipose
39 chr16:48280400-48281800 Enhancers Brain Cingulate Gyrus brain
40 chr16:48280400-48281800 Enhancers Psoas Muscle Psoas
41 chr16:48280400-48281800 Enhancers Skeletal Muscle Female skeletal muscle
42 chr16:48280400-48281800 Enhancers NHEK skin
43 chr16:48280400-48285400 Weak transcription K562 blood
44 chr16:48280400-48285800 Weak transcription Monocytes-CD14+_RO01746 blood
45 chr16:48280400-48286000 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr16:48280400-48286000 Weak transcription NHLF lung
47 chr16:48280400-48286800 Weak transcription Primary hematopoietic stem cells blood
48 chr16:48280400-48287000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
49 chr16:48280400-48287600 Weak transcription NH-A brain
50 chr16:48280400-48288600 Weak transcription Fetal Heart heart

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Last update: Aug 31, 2015