The 2.0 version of rSNPBase

Variant report

Variant rs1775446
Chromosome Location chr1:197746995-197746996
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:51 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:197744600-197751200 Weak transcription Small Intestine intestine
2 chr1:197745200-197747000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr1:197745200-197748200 Enhancers Primary B cells from cord blood blood
4 chr1:197745200-197748400 Enhancers Dnd41 blood
5 chr1:197745200-197748800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
6 chr1:197745200-197752800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
7 chr1:197745200-197756800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
8 chr1:197745400-197747600 Enhancers Primary T killer memory cells from peripheral blood blood
9 chr1:197745400-197749000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr1:197745400-197751200 Weak transcription Placenta Amnion Placenta Amnion
11 chr1:197745400-197752000 Weak transcription Esophagus oesophagus
12 chr1:197745600-197747400 Enhancers Monocytes-CD14+_RO01746 blood
13 chr1:197745600-197747600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
14 chr1:197745600-197748200 Enhancers Primary T helper 17 cells PMA-I stimulated --
15 chr1:197745600-197748200 Enhancers Primary T regulatory cells fromperipheralblood blood
16 chr1:197745600-197748200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
17 chr1:197745600-197748200 Enhancers Rectal Mucosa Donor 31 rectum
18 chr1:197745600-197748600 Enhancers Primary T helper naive cells from peripheral blood blood
19 chr1:197745600-197751000 Weak transcription NHLF lung
20 chr1:197745800-197747400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
21 chr1:197745800-197751000 Weak transcription Stomach Mucosa stomach
22 chr1:197745800-197751400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
23 chr1:197746000-197747200 Weak transcription Thymus Thymus
24 chr1:197746000-197747400 Weak transcription Primary T cells fromperipheralblood blood
25 chr1:197746000-197748200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
26 chr1:197746000-197748400 Enhancers Primary T helper cells PMA-I stimulated --
27 chr1:197746000-197751000 Weak transcription Fetal Intestine Large intestine
28 chr1:197746000-197751200 Weak transcription Fetal Intestine Small intestine
29 chr1:197746000-197751200 Weak transcription Hela-S3 cervix
30 chr1:197746200-197747200 Weak transcription K562 blood
31 chr1:197746200-197747400 Weak transcription Primary B cells from peripheral blood blood
32 chr1:197746200-197747400 Weak transcription Primary T helper naive cells fromperipheralblood blood
33 chr1:197746200-197747600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr1:197746200-197747800 Weak transcription Primary T killer naive cells fromperipheralblood blood
35 chr1:197746200-197750600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
36 chr1:197746200-197750600 Weak transcription NHEK skin
37 chr1:197746200-197751000 Weak transcription NHDF-Ad bronchial
38 chr1:197746200-197751000 Weak transcription Osteobl bone
39 chr1:197746200-197751200 Weak transcription Muscle Satellite Cultured Cells --
40 chr1:197746200-197751200 Weak transcription HMEC breast
41 chr1:197746400-197747400 Weak transcription Primary monocytes fromperipheralblood blood
42 chr1:197746400-197747400 Weak transcription Primary T helper cells fromperipheralblood blood
43 chr1:197746400-197748000 Weak transcription Duodenum Mucosa Duodenum
44 chr1:197746400-197751000 Weak transcription Colonic Mucosa Colon
45 chr1:197746400-197751200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr1:197746600-197747600 Weak transcription Primary hematopoietic stem cells short term culture blood
47 chr1:197746600-197747600 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr1:197746600-197747600 Enhancers GM12878-XiMat blood
49 chr1:197746600-197751200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr1:197746800-197747200 Weak transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015