The 2.0 version of rSNPBase

Variant report

Variant rs1747818
Chromosome Location chr1:197708342-197708343
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:56 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:197695800-197722000 Weak transcription Fetal Lung lung
2 chr1:197695800-197732800 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr1:197695800-197742200 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr1:197696000-197709200 Weak transcription Rectal Mucosa Donor 29 rectum
5 chr1:197696000-197716000 Weak transcription Duodenum Mucosa Duodenum
6 chr1:197697000-197709000 Weak transcription Primary T cells from cord blood blood
7 chr1:197701800-197711800 Weak transcription Fetal Heart heart
8 chr1:197702000-197711600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr1:197702600-197714200 Weak transcription K562 blood
10 chr1:197702800-197713600 Weak transcription Primary B cells from peripheral blood blood
11 chr1:197702800-197713600 Weak transcription Primary hematopoietic stem cells blood
12 chr1:197702800-197743800 Weak transcription Esophagus oesophagus
13 chr1:197703000-197709200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr1:197703000-197718400 Weak transcription Dnd41 blood
15 chr1:197705000-197709800 Weak transcription HepG2 liver
16 chr1:197705000-197711800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr1:197705200-197710000 Weak transcription Fetal Intestine Small intestine
18 chr1:197705400-197708400 Enhancers NHEK skin
19 chr1:197705600-197708400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr1:197706200-197710200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
21 chr1:197706200-197710600 Enhancers Primary T helper cells PMA-I stimulated --
22 chr1:197706400-197709200 Weak transcription Primary T helper naive cells fromperipheralblood blood
23 chr1:197706600-197709400 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr1:197706600-197709400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
25 chr1:197706600-197711600 Weak transcription Primary monocytes fromperipheralblood blood
26 chr1:197706600-197711800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
27 chr1:197706600-197729400 Weak transcription Breast Myoepithelial Primary Cells Breast
28 chr1:197706800-197711600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr1:197706800-197741800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
30 chr1:197707200-197708600 Enhancers Primary T helper naive cells from peripheral blood blood
31 chr1:197707400-197708400 Enhancers Primary T helper 17 cells PMA-I stimulated --
32 chr1:197707400-197708400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr1:197707400-197708400 Enhancers Colon Smooth Muscle Colon
34 chr1:197707400-197708400 Enhancers Left Ventricle heart
35 chr1:197707400-197708400 Enhancers Right Ventricle heart
36 chr1:197707400-197708600 Enhancers Psoas Muscle Psoas
37 chr1:197707400-197709200 Enhancers Primary T killer memory cells from peripheral blood blood
38 chr1:197707400-197709800 Weak transcription Stomach Mucosa stomach
39 chr1:197707600-197708400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr1:197707600-197709800 Enhancers Primary T helper cells fromperipheralblood blood
41 chr1:197707600-197712600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
42 chr1:197707800-197708400 Enhancers Primary T regulatory cells fromperipheralblood blood
43 chr1:197707800-197708400 Enhancers Primary Natural Killer cells fromperipheralblood blood
44 chr1:197708000-197708400 Enhancers Primary mononuclear cells fromperipheralblood Blood
45 chr1:197708000-197708400 Enhancers Lung lung
46 chr1:197708000-197708400 Enhancers Pancreas Pancrea
47 chr1:197708000-197708400 Enhancers Right Atrium heart
48 chr1:197708000-197708400 Enhancers Small Intestine intestine
49 chr1:197708000-197708400 Enhancers Thymus Thymus
50 chr1:197708000-197708600 Enhancers Primary T killer naive cells fromperipheralblood blood

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Last update: Aug 31, 2015