The 2.0 version of rSNPBase

Variant report

Variant rs1775442
Chromosome Location chr1:197712400-197712401
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:197695800-197722000 Weak transcription Fetal Lung lung
2 chr1:197695800-197732800 Weak transcription Rectal Mucosa Donor 31 rectum
3 chr1:197695800-197742200 Weak transcription Duodenum Smooth Muscle Duodenum
4 chr1:197696000-197716000 Weak transcription Duodenum Mucosa Duodenum
5 chr1:197702600-197714200 Weak transcription K562 blood
6 chr1:197702800-197713600 Weak transcription Primary B cells from peripheral blood blood
7 chr1:197702800-197713600 Weak transcription Primary hematopoietic stem cells blood
8 chr1:197702800-197743800 Weak transcription Esophagus oesophagus
9 chr1:197703000-197718400 Weak transcription Dnd41 blood
10 chr1:197706600-197729400 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr1:197706800-197741800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr1:197707600-197712600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr1:197708000-197716800 Weak transcription Skeletal Muscle Female skeletal muscle
14 chr1:197708000-197722600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr1:197708200-197714400 Weak transcription Ovary ovary
16 chr1:197708400-197712800 Weak transcription Small Intestine intestine
17 chr1:197708400-197713600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr1:197708400-197714200 Weak transcription Right Atrium heart
19 chr1:197708400-197714400 Weak transcription Left Ventricle heart
20 chr1:197708400-197715200 Weak transcription Pancreas Pancrea
21 chr1:197708400-197716200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
22 chr1:197708400-197719200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr1:197708400-197719200 Weak transcription Primary T regulatory cells fromperipheralblood blood
24 chr1:197708400-197721600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr1:197708400-197722800 Weak transcription Lung lung
26 chr1:197708400-197729800 Weak transcription NHEK skin
27 chr1:197708600-197719200 Weak transcription Primary T killer naive cells fromperipheralblood blood
28 chr1:197709600-197712400 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr1:197709600-197716800 Weak transcription Psoas Muscle Psoas
30 chr1:197709800-197718000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr1:197709800-197723000 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr1:197710400-197713600 Weak transcription Primary T helper cells fromperipheralblood blood
33 chr1:197710400-197724000 Weak transcription Primary T helper naive cells from peripheral blood blood
34 chr1:197710600-197714200 Weak transcription Primary B cells from cord blood blood
35 chr1:197710600-197718800 Weak transcription Primary T helper naive cells fromperipheralblood blood
36 chr1:197710600-197722400 Weak transcription Liver Liver
37 chr1:197711600-197712400 Enhancers Primary hematopoietic stem cells short term culture blood
38 chr1:197711600-197713000 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
39 chr1:197711800-197712400 Enhancers Fetal Heart heart
40 chr1:197711800-197713200 Enhancers Primary T cells from cord blood blood
41 chr1:197711800-197713400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
42 chr1:197712000-197712400 Weak transcription Primary T killer memory cells from peripheral blood blood
43 chr1:197712000-197713200 Enhancers Primary T helper cells PMA-I stimulated --
44 chr1:197712000-197716800 Weak transcription Monocytes-CD14+_RO01746 blood
45 chr1:197712200-197712600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
46 chr1:197712200-197714200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
47 chr1:197712200-197716800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
48 chr1:197712200-197731000 Weak transcription Primary monocytes fromperipheralblood blood
49 chr1:197712200-197741600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
50 chr1:197712200-197742000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015