The 2.0 version of rSNPBase

Variant report

Variant rs4915552
Chromosome Location chr1:197512778-197512779
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:197478000-197541200 Weak transcription Aorta Aorta
2 chr1:197480000-197535800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr1:197480200-197541200 Weak transcription Esophagus oesophagus
4 chr1:197480200-197541200 Weak transcription Fetal Thymus thymus
5 chr1:197480400-197541200 Weak transcription Sigmoid Colon Sigmoid Colon
6 chr1:197481200-197513400 Weak transcription Adipose Nuclei Adipose
7 chr1:197481400-197529600 Weak transcription Primary hematopoietic stem cells short term culture blood
8 chr1:197487800-197536000 Weak transcription Fetal Lung lung
9 chr1:197491600-197520800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr1:197496200-197532400 Weak transcription Duodenum Smooth Muscle Duodenum
11 chr1:197500600-197529400 Weak transcription Primary hematopoietic stem cells blood
12 chr1:197502200-197531800 Weak transcription Primary T cells fromperipheralblood blood
13 chr1:197502400-197534600 Weak transcription Fetal Intestine Large intestine
14 chr1:197503200-197524000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr1:197503200-197526400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr1:197503200-197541200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr1:197503600-197514400 Weak transcription Right Ventricle heart
18 chr1:197503600-197535800 Weak transcription Primary T helper naive cells fromperipheralblood blood
19 chr1:197504200-197529000 Weak transcription Fetal Intestine Small intestine
20 chr1:197505400-197532400 Weak transcription Breast Myoepithelial Primary Cells Breast
21 chr1:197505600-197541000 Weak transcription Pancreas Pancrea
22 chr1:197506000-197513800 Weak transcription Colon Smooth Muscle Colon
23 chr1:197506200-197526000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
24 chr1:197506400-197535800 Weak transcription Primary B cells from peripheral blood blood
25 chr1:197506600-197537600 Weak transcription Skeletal Muscle Female skeletal muscle
26 chr1:197506800-197535600 Weak transcription Primary B cells from cord blood blood
27 chr1:197506800-197564600 Weak transcription Primary T killer memory cells from peripheral blood blood
28 chr1:197507200-197519000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr1:197508400-197522400 Weak transcription Dnd41 blood
30 chr1:197508400-197602400 Weak transcription Left Ventricle heart
31 chr1:197508600-197528400 Weak transcription Rectal Mucosa Donor 29 rectum
32 chr1:197508600-197532200 Weak transcription Primary T cells from cord blood blood
33 chr1:197509000-197514000 Weak transcription Primary monocytes fromperipheralblood blood
34 chr1:197509000-197529600 Weak transcription Rectal Mucosa Donor 31 rectum
35 chr1:197509200-197529200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
36 chr1:197509200-197529600 Weak transcription Primary T helper cells fromperipheralblood blood
37 chr1:197509200-197535600 Weak transcription Duodenum Mucosa Duodenum
38 chr1:197509200-197535600 Weak transcription Monocytes-CD14+_RO01746 blood
39 chr1:197509400-197513800 Weak transcription Primary T helper cells PMA-I stimulated --
40 chr1:197509400-197536000 Weak transcription Liver Liver
41 chr1:197510200-197513800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
42 chr1:197511400-197535800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr1:197511800-197535600 Weak transcription Primary T regulatory cells fromperipheralblood blood
44 chr1:197512000-197529400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr1:197512400-197512800 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood

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Last update: Aug 31, 2015