The 2.0 version of rSNPBase

Variant report

Variant rs10442656
Chromosome Location chr1:197606708-197606709
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:197542000-197609000 Weak transcription Colonic Mucosa Colon
2 chr1:197542000-197626400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr1:197553000-197629800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
4 chr1:197565000-197611600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr1:197578600-197611000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr1:197586000-197609800 Weak transcription Primary T helper cells PMA-I stimulated --
7 chr1:197587000-197609800 Weak transcription Primary T cells fromperipheralblood blood
8 chr1:197587600-197610800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr1:197590000-197613400 Weak transcription Stomach Mucosa stomach
10 chr1:197591800-197610600 Weak transcription Fetal Intestine Large intestine
11 chr1:197593600-197628400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
12 chr1:197596600-197644800 Weak transcription Ovary ovary
13 chr1:197598800-197628600 Weak transcription NHDF-Ad bronchial
14 chr1:197599200-197628600 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr1:197602800-197615200 Weak transcription Pancreas Pancrea
16 chr1:197602800-197625000 Weak transcription Primary hematopoietic stem cells blood
17 chr1:197602800-197641400 Weak transcription Primary B cells from peripheral blood blood
18 chr1:197603000-197609600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr1:197603000-197611200 Weak transcription Adipose Nuclei Adipose
20 chr1:197603000-197612600 Weak transcription Primary T regulatory cells fromperipheralblood blood
21 chr1:197603000-197614000 Weak transcription Lung lung
22 chr1:197603000-197620400 Weak transcription Primary T helper naive cells fromperipheralblood blood
23 chr1:197603000-197621200 Weak transcription Stomach Smooth Muscle stomach
24 chr1:197603000-197625200 Weak transcription Thymus Thymus
25 chr1:197603000-197627800 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr1:197603000-197628600 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr1:197603000-197632400 Weak transcription Fetal Lung lung
28 chr1:197603000-197632600 Weak transcription Small Intestine intestine
29 chr1:197603200-197607600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr1:197603200-197609600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr1:197603200-197609800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr1:197603200-197610000 Weak transcription Primary hematopoietic stem cells short term culture blood
33 chr1:197603200-197611200 Weak transcription Primary B cells from cord blood blood
34 chr1:197603200-197625000 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr1:197603200-197625200 Weak transcription Left Ventricle heart
36 chr1:197603200-197626600 Weak transcription Fetal Stomach stomach
37 chr1:197603200-197628400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
38 chr1:197603200-197645000 Weak transcription Esophagus oesophagus
39 chr1:197603400-197607600 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr1:197603400-197618000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
41 chr1:197603400-197624800 Weak transcription Right Ventricle heart
42 chr1:197603400-197643400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
43 chr1:197603600-197610600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
44 chr1:197604000-197626400 Weak transcription Rectal Mucosa Donor 29 rectum
45 chr1:197604000-197628200 Weak transcription Liver Liver
46 chr1:197604200-197607200 Weak transcription Monocytes-CD14+_RO01746 blood
47 chr1:197604200-197608200 Weak transcription Fetal Intestine Small intestine
48 chr1:197604200-197609600 Weak transcription Primary monocytes fromperipheralblood blood
49 chr1:197604200-197611400 Weak transcription Duodenum Mucosa Duodenum
50 chr1:197604200-197611400 Weak transcription Fetal Thymus thymus

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Last update: Aug 31, 2015