The 2.0 version of rSNPBase

Variant report

Variant rs1775453
Chromosome Location chr1:197629342-197629343
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:197553000-197629800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr1:197596600-197644800 Weak transcription Ovary ovary
3 chr1:197602800-197641400 Weak transcription Primary B cells from peripheral blood blood
4 chr1:197603000-197632400 Weak transcription Fetal Lung lung
5 chr1:197603000-197632600 Weak transcription Small Intestine intestine
6 chr1:197603200-197645000 Weak transcription Esophagus oesophagus
7 chr1:197603400-197643400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
8 chr1:197604200-197635200 Weak transcription Aorta Aorta
9 chr1:197608600-197631400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr1:197610200-197640000 Weak transcription Fetal Intestine Small intestine
11 chr1:197611800-197644800 Weak transcription Primary monocytes fromperipheralblood blood
12 chr1:197612200-197642200 Weak transcription Primary B cells from cord blood blood
13 chr1:197612800-197644800 Weak transcription Fetal Intestine Large intestine
14 chr1:197612800-197645000 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr1:197619800-197633600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
16 chr1:197621400-197629800 Weak transcription Duodenum Mucosa Duodenum
17 chr1:197627200-197632600 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr1:197627400-197637600 Weak transcription Primary hematopoietic stem cells short term culture blood
19 chr1:197628200-197629800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
20 chr1:197628800-197630000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr1:197628800-197630200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr1:197628800-197630800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
23 chr1:197628800-197632600 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr1:197628800-197645000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
25 chr1:197629000-197630000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
26 chr1:197629000-197630000 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr1:197629000-197630000 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr1:197629000-197630200 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr1:197629000-197632400 Weak transcription Liver Liver
30 chr1:197629000-197633600 Weak transcription Monocytes-CD14+_RO01746 blood
31 chr1:197629000-197640400 Weak transcription Primary hematopoietic stem cells blood
32 chr1:197629000-197644600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr1:197629000-197645000 Weak transcription Dnd41 blood
34 chr1:197629000-197645200 Weak transcription Primary T regulatory cells fromperipheralblood blood
35 chr1:197629200-197629600 Weak transcription Primary T helper 17 cells PMA-I stimulated --

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Last update: Aug 31, 2015