Variant report

Variant rs1775450
Chromosome Location chr1:197652602-197652603
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:25 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:197640800-197657600 Weak transcription Primary hematopoietic stem cells blood
2 chr1:197644000-197656000 Weak transcription HUES6 Cell Line embryonic stem cell
3 chr1:197645200-197661000 Weak transcription Esophagus oesophagus
4 chr1:197645400-197655600 Weak transcription Primary T helper cells PMA-I stimulated --
5 chr1:197645600-197657400 Weak transcription Primary T regulatory cells fromperipheralblood blood
6 chr1:197646400-197652800 Weak transcription Pancreatic Islets Pancreatic Islet
7 chr1:197647200-197657400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr1:197650000-197654800 Weak transcription Liver Liver
9 chr1:197650800-197653600 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr1:197651800-197653000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr1:197651800-197653400 Enhancers Fetal Lung lung
12 chr1:197652000-197652800 Enhancers HUES48 Cell Line embryonic stem cell
13 chr1:197652000-197654800 Weak transcription iPS-20b Cell Line embryonic stem cell
14 chr1:197652200-197655800 Weak transcription iPS-15b Cell Line embryonic stem cell
15 chr1:197652400-197652800 Weak transcription iPS-18 Cell Line embryonic stem cell
16 chr1:197652400-197653200 Enhancers Right Atrium heart
17 chr1:197652400-197653400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
18 chr1:197652400-197653600 Enhancers Fetal Heart heart
19 chr1:197652400-197654000 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
20 chr1:197652600-197653200 Enhancers Left Ventricle heart
21 chr1:197652600-197653200 Enhancers Right Ventricle heart
22 chr1:197652600-197653400 Flanking Active TSS NHEK skin
23 chr1:197652600-197653600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
24 chr1:197652600-197653600 Enhancers HMEC breast
25 chr1:197652600-197657000 Weak transcription Pancreas Pancrea

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