Variant report

Variant rs1578720
Chromosome Location chr1:197657149-197657150
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:26 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:197640800-197657600 Weak transcription Primary hematopoietic stem cells blood
2 chr1:197645200-197661000 Weak transcription Esophagus oesophagus
3 chr1:197645600-197657400 Weak transcription Primary T regulatory cells fromperipheralblood blood
4 chr1:197647200-197657400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr1:197652800-197657200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
6 chr1:197653000-197665200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr1:197653000-197665400 Weak transcription Osteobl bone
8 chr1:197653200-197659400 Weak transcription Left Ventricle heart
9 chr1:197653200-197660600 Weak transcription Skeletal Muscle Male skeletal muscle
10 chr1:197653400-197662000 Weak transcription Rectal Smooth Muscle rectum
11 chr1:197653600-197660600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr1:197653600-197660800 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr1:197654000-197657600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr1:197654600-197662200 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr1:197655600-197657200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr1:197655600-197657400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
17 chr1:197656000-197662000 Weak transcription iPS-15b Cell Line embryonic stem cell
18 chr1:197656200-197657200 Weak transcription iPS-20b Cell Line embryonic stem cell
19 chr1:197656200-197659600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr1:197656200-197663600 Weak transcription Primary T helper cells fromperipheralblood blood
21 chr1:197656400-197657800 Weak transcription Fetal Lung lung
22 chr1:197656400-197660400 Weak transcription Primary monocytes fromperipheralblood blood
23 chr1:197656600-197657600 Weak transcription Liver Liver
24 chr1:197656800-197659000 Weak transcription Fetal Thymus thymus
25 chr1:197657000-197657400 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr1:197657000-197677000 Weak transcription Ovary ovary

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