The 2.0 version of rSNPBase

Variant report

Variant rs1775443
Chromosome Location chr1:197740213-197740214
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:197695800-197742200 Weak transcription Duodenum Smooth Muscle Duodenum
2 chr1:197702800-197743800 Weak transcription Esophagus oesophagus
3 chr1:197706800-197741800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
4 chr1:197712200-197741600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
5 chr1:197712200-197742000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
6 chr1:197714400-197743800 Weak transcription Spleen Spleen
7 chr1:197714600-197741600 Weak transcription Primary T cells fromperipheralblood blood
8 chr1:197714600-197742400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr1:197714600-197743600 Weak transcription Ovary ovary
10 chr1:197715400-197741800 Weak transcription Gastric stomach
11 chr1:197718600-197741800 Weak transcription Osteobl bone
12 chr1:197719200-197743800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
13 chr1:197720200-197740600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr1:197721200-197743000 Weak transcription Fetal Kidney kidney
15 chr1:197722600-197740800 Weak transcription Fetal Lung lung
16 chr1:197729200-197740600 Weak transcription Fetal Intestine Large intestine
17 chr1:197730200-197742600 Weak transcription HMEC breast
18 chr1:197730600-197742600 Weak transcription NH-A brain
19 chr1:197731400-197742400 Weak transcription Primary B cells from cord blood blood
20 chr1:197731600-197743200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
21 chr1:197732000-197742400 Weak transcription Primary B cells from peripheral blood blood
22 chr1:197732200-197740600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr1:197732400-197740400 Weak transcription Fetal Intestine Small intestine
24 chr1:197733000-197740600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr1:197733000-197741600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr1:197733200-197740600 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr1:197733200-197740600 Weak transcription Rectal Mucosa Donor 29 rectum
28 chr1:197733200-197741800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr1:197733200-197742400 Weak transcription Stomach Mucosa stomach
30 chr1:197733400-197743000 Weak transcription A549 lung
31 chr1:197734200-197742600 Weak transcription Pancreatic Islets Pancreatic Islet
32 chr1:197734600-197742200 Weak transcription NHLF lung
33 chr1:197735200-197743800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr1:197736200-197742400 Enhancers Primary T helper memory cells from peripheral blood 2 blood
35 chr1:197736200-197743200 Weak transcription Right Ventricle heart
36 chr1:197737000-197740600 Genic enhancers Dnd41 blood
37 chr1:197737200-197742800 Weak transcription Fetal Stomach stomach
38 chr1:197737400-197740600 Weak transcription Primary neutrophils fromperipheralblood blood
39 chr1:197737400-197740600 Weak transcription Skeletal Muscle Male skeletal muscle
40 chr1:197737400-197741200 Weak transcription Thymus Thymus
41 chr1:197737400-197741600 Weak transcription Right Atrium heart
42 chr1:197737400-197741800 Weak transcription Hela-S3 cervix
43 chr1:197737400-197743600 Weak transcription Fetal Muscle Trunk muscle
44 chr1:197737800-197740400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr1:197737800-197740600 Weak transcription Duodenum Mucosa Duodenum
46 chr1:197737800-197740600 Weak transcription K562 blood
47 chr1:197737800-197740800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
48 chr1:197737800-197742400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr1:197737800-197743000 Weak transcription Fetal Muscle Leg muscle
50 chr1:197738000-197740600 Weak transcription Primary hematopoietic stem cells blood

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Last update: Aug 31, 2015