The 2.0 version of rSNPBase

Variant report

Variant rs2636281
Chromosome Location chr1:179184140-179184141
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:70 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:179117800-179186000 Weak transcription Fetal Stomach stomach
2 chr1:179122000-179189400 Weak transcription Primary B cells from cord blood blood
3 chr1:179139400-179196800 Weak transcription Pancreas Pancrea
4 chr1:179148000-179186000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
5 chr1:179148400-179185800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
6 chr1:179157400-179197400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
7 chr1:179157400-179197600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr1:179160200-179186800 Weak transcription Primary hematopoietic stem cells blood
9 chr1:179160800-179188000 Weak transcription Primary T helper cells fromperipheralblood blood
10 chr1:179169000-179197400 Weak transcription NHEK skin
11 chr1:179170200-179197200 Weak transcription Fetal Intestine Large intestine
12 chr1:179171800-179186600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
13 chr1:179172200-179186600 Weak transcription Primary hematopoietic stem cells short term culture blood
14 chr1:179172800-179189800 Weak transcription Primary T cells from cord blood blood
15 chr1:179173000-179187600 Weak transcription Small Intestine intestine
16 chr1:179174800-179186600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr1:179175200-179189200 Weak transcription Primary T helper cells PMA-I stimulated --
18 chr1:179176200-179185000 Weak transcription Brain Cingulate Gyrus brain
19 chr1:179176200-179186800 Weak transcription Duodenum Mucosa Duodenum
20 chr1:179176200-179187000 Weak transcription NHDF-Ad bronchial
21 chr1:179176200-179187200 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr1:179176200-179195800 Weak transcription Colon Smooth Muscle Colon
23 chr1:179176200-179195800 Weak transcription Rectal Mucosa Donor 31 rectum
24 chr1:179176200-179196600 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr1:179176200-179197600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr1:179176400-179187800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
27 chr1:179176400-179196200 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr1:179176400-179197000 Weak transcription Fetal Brain Male brain
29 chr1:179176400-179197400 Weak transcription Fetal Lung lung
30 chr1:179176400-179197600 Weak transcription Left Ventricle heart
31 chr1:179176600-179196200 Weak transcription Brain Hippocampus Middle brain
32 chr1:179176800-179189400 Weak transcription Brain Inferior Temporal Lobe brain
33 chr1:179177000-179196000 Weak transcription Fetal Brain Female brain
34 chr1:179177000-179197600 Weak transcription HSMMtube muscle
35 chr1:179177400-179197200 Weak transcription Brain Germinal Matrix brain
36 chr1:179177800-179196600 Weak transcription Pancreatic Islets Pancreatic Islet
37 chr1:179178000-179196000 Weak transcription Aorta Aorta
38 chr1:179178000-179197600 Weak transcription Gastric stomach
39 chr1:179178400-179185800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
40 chr1:179178400-179189400 Weak transcription HepG2 liver
41 chr1:179178400-179189600 Weak transcription Fetal Adrenal Gland Adrenal Gland
42 chr1:179178400-179197600 Weak transcription HUES64 Cell Line embryonic stem cell
43 chr1:179178600-179186200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr1:179178600-179187000 Weak transcription Liver Liver
45 chr1:179178600-179187000 Weak transcription HUVEC blood vessel
46 chr1:179178600-179189000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
47 chr1:179178600-179197600 Weak transcription HUES6 Cell Line embryonic stem cell
48 chr1:179178600-179197600 Weak transcription NH-A brain
49 chr1:179178800-179186200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr1:179178800-179197400 Weak transcription ES-I3 Cell Line embryonic stem cell

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Last update: Aug 31, 2015