The 2.0 version of rSNPBase

Variant report

Variant rs2793793
Chromosome Location chr1:179140145-179140146
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:64 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:179117800-179186000 Weak transcription Fetal Stomach stomach
2 chr1:179122000-179189400 Weak transcription Primary B cells from cord blood blood
3 chr1:179122400-179153000 Weak transcription Primary T cells from cord blood blood
4 chr1:179122800-179141600 Weak transcription Fetal Intestine Large intestine
5 chr1:179134000-179146600 Weak transcription HUES64 Cell Line embryonic stem cell
6 chr1:179134000-179169000 Weak transcription Fetal Intestine Small intestine
7 chr1:179136400-179144400 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr1:179136600-179140600 Weak transcription Psoas Muscle Psoas
9 chr1:179136800-179146200 Weak transcription Fetal Heart heart
10 chr1:179138200-179144400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
11 chr1:179139200-179143800 Weak transcription Brain Angular Gyrus brain
12 chr1:179139400-179140400 Enhancers NHDF-Ad bronchial
13 chr1:179139400-179140600 Weak transcription Gastric stomach
14 chr1:179139400-179140600 Weak transcription Spleen Spleen
15 chr1:179139400-179143600 Weak transcription Primary monocytes fromperipheralblood blood
16 chr1:179139400-179143800 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr1:179139400-179144200 Weak transcription Adipose Nuclei Adipose
18 chr1:179139400-179144200 Weak transcription Brain Substantia Nigra brain
19 chr1:179139400-179144200 Weak transcription HSMMtube muscle
20 chr1:179139400-179144200 Weak transcription Monocytes-CD14+_RO01746 blood
21 chr1:179139400-179144400 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr1:179139400-179144400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
23 chr1:179139400-179144400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
24 chr1:179139400-179144400 Weak transcription Aorta Aorta
25 chr1:179139400-179144400 Weak transcription Brain Cingulate Gyrus brain
26 chr1:179139400-179144400 Weak transcription Brain Inferior Temporal Lobe brain
27 chr1:179139400-179144400 Weak transcription Colon Smooth Muscle Colon
28 chr1:179139400-179144400 Weak transcription Ovary ovary
29 chr1:179139400-179144400 Weak transcription Osteobl bone
30 chr1:179139400-179146200 Weak transcription Rectal Smooth Muscle rectum
31 chr1:179139400-179146400 Weak transcription Right Atrium heart
32 chr1:179139400-179157200 Weak transcription K562 blood
33 chr1:179139400-179158800 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr1:179139400-179196800 Weak transcription Pancreas Pancrea
35 chr1:179139600-179143800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr1:179139600-179143800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
37 chr1:179139600-179143800 Weak transcription Brain Anterior Caudate brain
38 chr1:179139600-179144000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr1:179139600-179144200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr1:179139600-179144200 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr1:179139600-179144200 Weak transcription Brain Hippocampus Middle brain
42 chr1:179139600-179144200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
43 chr1:179139600-179144200 Weak transcription Skeletal Muscle Male skeletal muscle
44 chr1:179139600-179144200 Weak transcription A549 lung
45 chr1:179139600-179144200 Weak transcription Hela-S3 cervix
46 chr1:179139600-179144200 Weak transcription HMEC breast
47 chr1:179139600-179144200 Weak transcription HSMM muscle
48 chr1:179139600-179144200 Weak transcription NH-A brain
49 chr1:179139600-179144200 Weak transcription NHEK skin
50 chr1:179139600-179144200 Weak transcription NHLF lung

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Last update: Aug 31, 2015