Variant report

Variant rs2493124
Chromosome Location chr1:179099021-179099022
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:179063200-179112000 Weak transcription Fetal Kidney kidney
2 chr1:179079600-179109800 Weak transcription Small Intestine intestine
3 chr1:179080200-179101600 Weak transcription Fetal Brain Male brain
4 chr1:179080400-179103800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr1:179086600-179105000 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr1:179087800-179113000 Weak transcription Placenta Amnion Placenta Amnion
7 chr1:179088200-179102400 Weak transcription Brain Germinal Matrix brain
8 chr1:179088400-179099200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
9 chr1:179088400-179099400 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr1:179089200-179099400 Weak transcription iPS-18 Cell Line embryonic stem cell
11 chr1:179090800-179099200 Weak transcription HUES64 Cell Line embryonic stem cell
12 chr1:179090800-179104400 Weak transcription Fetal Brain Female brain
13 chr1:179091000-179108800 Weak transcription H9 Cell Line embryonic stem cell
14 chr1:179091000-179109000 Weak transcription ES-I3 Cell Line embryonic stem cell
15 chr1:179091000-179109200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
16 chr1:179093400-179117200 Weak transcription Fetal Stomach stomach
17 chr1:179093800-179099600 Genic enhancers HMEC breast
18 chr1:179094000-179099600 Genic enhancers Osteobl bone
19 chr1:179094400-179099600 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr1:179095200-179099800 Genic enhancers NHEK skin
21 chr1:179095600-179101000 Genic enhancers Foreskin Melanocyte Primary Cells skin03 Skin
22 chr1:179095800-179099400 Weak transcription iPS-20b Cell Line embryonic stem cell
23 chr1:179095800-179100800 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
24 chr1:179095800-179101800 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr1:179095800-179103600 Weak transcription Fetal Intestine Large intestine
26 chr1:179095800-179106800 Weak transcription Gastric stomach
27 chr1:179095800-179107400 Weak transcription H1 Cell Line embryonic stem cell
28 chr1:179096400-179108800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr1:179096600-179106800 Weak transcription Fetal Lung lung
30 chr1:179096600-179110200 Weak transcription Cortex derived primary cultured neurospheres brain
31 chr1:179096800-179099400 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr1:179097000-179101600 Genic enhancers HUVEC blood vessel
33 chr1:179097600-179099400 Enhancers Stomach Mucosa stomach
34 chr1:179097800-179099200 Enhancers Sigmoid Colon Sigmoid Colon
35 chr1:179097800-179099400 Enhancers Primary B cells from cord blood blood
36 chr1:179097800-179099400 Genic enhancers Left Ventricle heart
37 chr1:179097800-179099600 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
38 chr1:179097800-179099600 Enhancers Primary B cells from peripheral blood blood
39 chr1:179097800-179099800 Genic enhancers Foreskin Fibroblast Primary Cells skin02 Skin
40 chr1:179097800-179100000 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
41 chr1:179098200-179099600 Genic enhancers K562 blood
42 chr1:179098200-179112000 Weak transcription Lung lung
43 chr1:179098400-179099200 Active TSS Primary mononuclear cells fromperipheralblood Blood
44 chr1:179098400-179099200 Active TSS Brain Cingulate Gyrus brain
45 chr1:179098400-179099200 Flanking Active TSS Dnd41 blood
46 chr1:179098400-179099200 Flanking Active TSS GM12878-XiMat blood
47 chr1:179098400-179099400 Flanking Active TSS Primary T cells fromperipheralblood blood
48 chr1:179098400-179099400 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
49 chr1:179098400-179099400 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
50 chr1:179098400-179099400 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood

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