Variant report

Variant rs3813643
Chromosome Location chr1:179070334-179070335
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:179053000-179072200 Strong transcription Primary T cells from cord blood blood
2 chr1:179053200-179071000 Strong transcription NHEK skin
3 chr1:179053200-179096000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr1:179053800-179074600 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr1:179054000-179071000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr1:179054000-179074800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
7 chr1:179054000-179077200 Weak transcription Primary T helper naive cells from peripheral blood blood
8 chr1:179054000-179079400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr1:179054800-179072200 Strong transcription Breast Myoepithelial Primary Cells Breast
10 chr1:179057200-179076800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
11 chr1:179059200-179096400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr1:179059400-179090400 Strong transcription HUVEC blood vessel
13 chr1:179061400-179071000 Strong transcription Fetal Muscle Leg muscle
14 chr1:179061400-179071600 Weak transcription Fetal Heart heart
15 chr1:179061400-179090400 Strong transcription HSMM muscle
16 chr1:179061600-179070800 Strong transcription Osteobl bone
17 chr1:179061600-179071000 Strong transcription Fetal Adrenal Gland Adrenal Gland
18 chr1:179061600-179072400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
19 chr1:179061600-179075200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
20 chr1:179061600-179075600 Strong transcription HSMMtube muscle
21 chr1:179061600-179076400 Weak transcription Right Atrium heart
22 chr1:179061600-179076600 Strong transcription Muscle Satellite Cultured Cells --
23 chr1:179062000-179088000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr1:179062400-179075600 Strong transcription NH-A brain
25 chr1:179063200-179112000 Weak transcription Fetal Kidney kidney
26 chr1:179063400-179077000 Weak transcription Stomach Mucosa stomach
27 chr1:179064200-179071000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
28 chr1:179064200-179078200 Weak transcription Right Ventricle heart
29 chr1:179064600-179070600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
30 chr1:179064600-179077200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr1:179064800-179075800 Weak transcription Placenta Amnion Placenta Amnion
32 chr1:179064800-179077000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
33 chr1:179064800-179079200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
34 chr1:179064800-179097800 Weak transcription Primary T killer memory cells from peripheral blood blood
35 chr1:179065000-179070600 Strong transcription NHDF-Ad bronchial
36 chr1:179065000-179075800 Weak transcription Brain Angular Gyrus brain
37 chr1:179065000-179077400 Weak transcription Colonic Mucosa Colon
38 chr1:179065000-179078000 Weak transcription Primary T killer naive cells fromperipheralblood blood
39 chr1:179065400-179070400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
40 chr1:179065400-179073800 Strong transcription NHLF lung
41 chr1:179065400-179076200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr1:179065400-179076200 Weak transcription Colon Smooth Muscle Colon
43 chr1:179065400-179076800 Weak transcription Small Intestine intestine
44 chr1:179065600-179074000 Weak transcription Fetal Lung lung
45 chr1:179065600-179075800 Weak transcription Primary T helper naive cells fromperipheralblood blood
46 chr1:179065800-179076400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
47 chr1:179066400-179076200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
48 chr1:179066400-179076800 Weak transcription Primary T helper cells fromperipheralblood blood
49 chr1:179066400-179077200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
50 chr1:179066600-179070400 Weak transcription Skeletal Muscle Male skeletal muscle

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