The 2.0 version of rSNPBase

Variant report

Variant rs2816197
Chromosome Location chr1:179158406-179158407
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:179117800-179186000 Weak transcription Fetal Stomach stomach
2 chr1:179122000-179189400 Weak transcription Primary B cells from cord blood blood
3 chr1:179134000-179169000 Weak transcription Fetal Intestine Small intestine
4 chr1:179139400-179158800 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:179139400-179196800 Weak transcription Pancreas Pancrea
6 chr1:179144800-179159200 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr1:179145000-179158600 Weak transcription Primary hematopoietic stem cells short term culture blood
8 chr1:179145000-179159800 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr1:179145000-179159800 Weak transcription Brain Angular Gyrus brain
10 chr1:179145400-179159000 Weak transcription Right Ventricle heart
11 chr1:179146800-179175600 Weak transcription Cortex derived primary cultured neurospheres brain
12 chr1:179147600-179160000 Weak transcription Primary B cells from peripheral blood blood
13 chr1:179147600-179174600 Weak transcription Psoas Muscle Psoas
14 chr1:179148000-179186000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr1:179148400-179185800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
16 chr1:179150600-179176000 Weak transcription HSMM muscle
17 chr1:179150800-179170600 Weak transcription Ovary ovary
18 chr1:179150800-179178000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr1:179150800-179180400 Weak transcription Breast Myoepithelial Primary Cells Breast
20 chr1:179152400-179158600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr1:179153600-179160000 Weak transcription GM12878-XiMat blood
22 chr1:179153600-179169800 Weak transcription Small Intestine intestine
23 chr1:179154000-179171600 Weak transcription Primary T cells from cord blood blood
24 chr1:179154200-179159400 Weak transcription Primary monocytes fromperipheralblood blood
25 chr1:179154400-179159800 Weak transcription Monocytes-CD14+_RO01746 blood
26 chr1:179155600-179160200 Weak transcription Primary T regulatory cells fromperipheralblood blood
27 chr1:179156400-179169200 Weak transcription Fetal Intestine Large intestine
28 chr1:179156400-179177800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
29 chr1:179156800-179171400 Weak transcription HUES48 Cell Line embryonic stem cell
30 chr1:179157400-179159800 Weak transcription Osteobl bone
31 chr1:179157400-179164200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr1:179157400-179197400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
33 chr1:179157400-179197600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
34 chr1:179157600-179158600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr1:179157600-179170600 Weak transcription Lung lung
36 chr1:179157600-179177800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
37 chr1:179157800-179159800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr1:179158000-179160000 Weak transcription Primary T helper cells fromperipheralblood blood
39 chr1:179158200-179158600 Weak transcription K562 blood

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Last update: Aug 31, 2015