Variant report
Variant | rs28839618 |
---|---|
Chromosome Location | chr17:59701706-59701707 |
allele | G/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:6)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:6 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr17:59700646..59702356-chr17:59702488..59704134,2 | MCF-7 | breast: | |
2 | chr17:59700754..59703552-chr17:59708275..59711743,3 | MCF-7 | breast: | |
3 | chr17:59700832..59702613-chr17:59704531..59707151,3 | MCF-7 | breast: | |
4 | chr17:59700010..59701801-chr17:59719540..59721809,2 | MCF-7 | breast: | |
5 | chr17:59701096..59703169-chr17:59794150..59795732,2 | MCF-7 | breast: | |
6 | chr17:59700536..59703582-chr17:59926981..59930844,3 | MCF-7 | breast: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs11079449 | 1.00[AMR][1000 genomes] |
rs11079450 | 0.85[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs16945451 | 1.00[AMR][1000 genomes] |
rs16945455 | 1.00[AMR][1000 genomes] |
rs16945466 | 1.00[AMR][1000 genomes] |
rs16945472 | 1.00[AMR][1000 genomes] |
rs16945489 | 0.83[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs16945495 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs16945522 | 0.87[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs2378882 | 1.00[AMR][1000 genomes] |
rs28409395 | 1.00[AMR][1000 genomes] |
rs28637035 | 1.00[AMR][1000 genomes] |
rs60066089 | 0.81[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs61739271 | 1.00[AMR][1000 genomes] |
rs7207425 | 1.00[AMR][1000 genomes] |
rs7212941 | 1.00[AMR][1000 genomes] |
rs7213607 | 1.00[AMR][1000 genomes] |
rs7213652 | 1.00[AMR][1000 genomes] |
rs7219055 | 1.00[AMR][1000 genomes] |
rs7223319 | 1.00[AMR][1000 genomes] |
rs7225251 | 1.00[AMR][1000 genomes] |
rs8067024 | 1.00[AMR][1000 genomes] |
rs9303447 | 1.00[AMR][1000 genomes] |
rs9892156 | 1.00[AMR][1000 genomes] |
rs9892747 | 1.00[AMR][1000 genomes] |
rs9893569 | 1.00[AMR][1000 genomes] |
rs9894800 | 0.87[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs9896244 | 1.00[AMR][1000 genomes] |
rs9897645 | 0.96[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs9897967 | 0.85[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs9897971 | 1.00[AMR][1000 genomes] |
rs9898853 | 1.00[AMR][1000 genomes] |
rs9899420 | 0.85[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs9901535 | 1.00[AMR][1000 genomes] |
rs9901665 | 0.83[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs9902352 | 0.87[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs9902447 | 1.00[AMR][1000 genomes] |
rs9903376 | 0.88[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs9909664 | 1.00[AMR][1000 genomes] |
rs9910311 | 1.00[AMR][1000 genomes] |
rs9910461 | 1.00[AMR][1000 genomes] |
rs9910726 | 0.85[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs9911403 | 1.00[AMR][1000 genomes] |
rs9912137 | 1.00[AMR][1000 genomes] |
rs9912417 | 1.00[AMR][1000 genomes] |
rs9916169 | 1.00[AMR][1000 genomes] |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr17:59699400-59702000 | Weak transcription | Liver | Liver |