Variant report
Variant | rs60066089 |
---|---|
Chromosome Location | chr17:59727942-59727943 |
allele | C/T |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:7)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:7 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr17:59381570..59383653-chr17:59727365..59729457,2 | MCF-7 | breast: | |
2 | chr17:59725720..59728552-chr17:59906098..59908318,3 | MCF-7 | breast: | |
3 | chr17:59727177..59731742-chr17:59925702..59928839,4 | MCF-7 | breast: | |
4 | chr17:59725714..59728586-chr5:90675780..90678400,2 | MCF-7 | breast: | |
5 | chr17:59721722..59724178-chr17:59726646..59728632,2 | K562 | blood: | |
6 | chr17:59725828..59728506-chr20:49305077..49307590,2 | MCF-7 | breast: | |
7 | chr17:59725121..59727950-chr20:52195788..52197594,2 | MCF-7 | breast: |
No data |
No data |
No data |
Variant related genes | Relation type |
---|---|
ENSG00000113369 | Chromatin interaction |
rs_ID | r2[population] |
---|---|
rs11079449 | 1.00[AMR][1000 genomes] |
rs11079450 | 1.00[AMR][1000 genomes] |
rs16945451 | 1.00[AMR][1000 genomes] |
rs16945455 | 1.00[AMR][1000 genomes] |
rs16945466 | 1.00[AMR][1000 genomes] |
rs16945472 | 1.00[AMR][1000 genomes] |
rs16945489 | 0.92[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs16945495 | 0.81[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs16945522 | 1.00[AMR][1000 genomes] |
rs2378882 | 1.00[AMR][1000 genomes] |
rs28409395 | 1.00[AMR][1000 genomes] |
rs28637035 | 1.00[AMR][1000 genomes] |
rs28839618 | 0.81[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs61739271 | 1.00[AMR][1000 genomes] |
rs7207425 | 1.00[AMR][1000 genomes] |
rs7212941 | 1.00[AMR][1000 genomes] |
rs7213607 | 1.00[AMR][1000 genomes] |
rs7213652 | 1.00[AMR][1000 genomes] |
rs7219055 | 1.00[AMR][1000 genomes] |
rs7223319 | 1.00[AMR][1000 genomes] |
rs7225251 | 1.00[AMR][1000 genomes] |
rs8067024 | 1.00[AMR][1000 genomes] |
rs9303447 | 1.00[AMR][1000 genomes] |
rs9892156 | 1.00[AMR][1000 genomes] |
rs9892747 | 1.00[AMR][1000 genomes] |
rs9893569 | 1.00[AMR][1000 genomes] |
rs9894800 | 0.83[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs9896244 | 1.00[AMR][1000 genomes] |
rs9897645 | 0.81[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs9897967 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs9897971 | 1.00[AMR][1000 genomes] |
rs9898853 | 1.00[AMR][1000 genomes] |
rs9899420 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs9901535 | 1.00[AMR][1000 genomes] |
rs9901665 | 0.98[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs9902352 | 1.00[AMR][1000 genomes] |
rs9902447 | 1.00[AMR][1000 genomes] |
rs9903376 | 1.00[AMR][1000 genomes] |
rs9909664 | 1.00[AMR][1000 genomes] |
rs9910311 | 1.00[AMR][1000 genomes] |
rs9910461 | 1.00[AMR][1000 genomes] |
rs9910726 | 0.93[AFR][1000 genomes];1.00[AMR][1000 genomes] |
rs9911403 | 1.00[AMR][1000 genomes] |
rs9912137 | 1.00[AMR][1000 genomes] |
rs9912417 | 1.00[AMR][1000 genomes] |
rs9916169 | 1.00[AMR][1000 genomes] |
No data |