The 2.0 version of rSNPBase

Variant report

Variant rs2959086
Chromosome Location chr11:46102319-46102320
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:112 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46063200-46119800 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr11:46063600-46104600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr11:46071400-46114800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr11:46071400-46118800 Weak transcription Lung lung
5 chr11:46072000-46119400 Weak transcription Brain Angular Gyrus brain
6 chr11:46073800-46122200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr11:46077600-46109400 Weak transcription HepG2 liver
8 chr11:46079000-46128200 Weak transcription Aorta Aorta
9 chr11:46080400-46120800 Weak transcription Stomach Smooth Muscle stomach
10 chr11:46080600-46103000 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr11:46082000-46114000 Strong transcription Monocytes-CD14+_RO01746 blood
12 chr11:46083600-46107600 Strong transcription Primary monocytes fromperipheralblood blood
13 chr11:46084800-46104800 Weak transcription Fetal Brain Male brain
14 chr11:46084800-46118600 Weak transcription Pancreas Pancrea
15 chr11:46085000-46119600 Weak transcription Brain Germinal Matrix brain
16 chr11:46085400-46106000 Strong transcription Primary neutrophils fromperipheralblood blood
17 chr11:46085800-46111000 Weak transcription Placenta Amnion Placenta Amnion
18 chr11:46086600-46112200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
19 chr11:46087200-46120800 Weak transcription H1 Cell Line embryonic stem cell
20 chr11:46087400-46103800 Weak transcription HUES48 Cell Line embryonic stem cell
21 chr11:46087400-46104000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
22 chr11:46087600-46120400 Weak transcription HSMMtube muscle
23 chr11:46087600-46121000 Weak transcription Primary T helper naive cells from peripheral blood blood
24 chr11:46089600-46120400 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr11:46089800-46109600 Weak transcription Fetal Kidney kidney
26 chr11:46089800-46111400 Weak transcription Hela-S3 cervix
27 chr11:46092600-46112200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
28 chr11:46092800-46113200 Weak transcription Small Intestine intestine
29 chr11:46093400-46120000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr11:46093800-46104400 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr11:46094400-46102600 Weak transcription HSMM muscle
32 chr11:46094400-46109400 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr11:46094400-46118200 Weak transcription Ovary ovary
34 chr11:46094400-46119600 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr11:46094400-46120200 Weak transcription Brain Inferior Temporal Lobe brain
36 chr11:46094400-46128200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr11:46094600-46120800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
38 chr11:46095000-46121800 Weak transcription Fetal Intestine Small intestine
39 chr11:46096800-46104000 Strong transcription Primary B cells from peripheral blood blood
40 chr11:46096800-46120800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr11:46097200-46103800 Weak transcription NHDF-Ad bronchial
42 chr11:46097200-46109800 Weak transcription NH-A brain
43 chr11:46097200-46111400 Weak transcription Colon Smooth Muscle Colon
44 chr11:46097200-46120800 Weak transcription Muscle Satellite Cultured Cells --
45 chr11:46097200-46121200 Weak transcription HUVEC blood vessel
46 chr11:46097400-46102800 Weak transcription A549 lung
47 chr11:46097400-46109000 Weak transcription Cortex derived primary cultured neurospheres brain
48 chr11:46097400-46120800 Weak transcription HMEC breast
49 chr11:46097600-46102400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr11:46097600-46104800 Weak transcription HUES64 Cell Line embryonic stem cell

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Last update: Aug 31, 2015