The 2.0 version of rSNPBase

Variant report

Variant rs571593
Chromosome Location chr11:104904298-104904299
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:104894200-104905600 Weak transcription Esophagus oesophagus
2 chr11:104897800-104905600 Weak transcription Ovary ovary
3 chr11:104899200-104905400 Weak transcription Aorta Aorta
4 chr11:104899400-104905400 Weak transcription Fetal Brain Male brain
5 chr11:104899400-104905600 Weak transcription Fetal Muscle Trunk muscle
6 chr11:104899600-104905200 Weak transcription Fetal Adrenal Gland Adrenal Gland
7 chr11:104899600-104909200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr11:104899800-104905000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr11:104901600-104904600 Weak transcription Placenta Placenta
10 chr11:104901600-104905000 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr11:104902000-104905400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr11:104902200-104906800 Weak transcription Gastric stomach
13 chr11:104903000-104904400 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
14 chr11:104903000-104906000 Active TSS Primary monocytes fromperipheralblood blood
15 chr11:104903000-104906000 Active TSS Duodenum Smooth Muscle Duodenum
16 chr11:104903200-104904400 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
17 chr11:104903200-104904400 Flanking Active TSS Primary T killer memory cells from peripheral blood blood
18 chr11:104903200-104904600 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
19 chr11:104903200-104904800 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
20 chr11:104903200-104905000 Flanking Active TSS Primary T helper cells PMA-I stimulated --
21 chr11:104903200-104906200 Active TSS Rectal Mucosa Donor 29 rectum
22 chr11:104903200-104906200 Flanking Active TSS Dnd41 blood
23 chr11:104903200-104906400 Active TSS Rectal Smooth Muscle rectum
24 chr11:104903400-104904400 Enhancers Spleen Spleen
25 chr11:104903400-104905200 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
26 chr11:104903400-104905200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
27 chr11:104903400-104906000 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
28 chr11:104903400-104906000 Active TSS GM12878-XiMat blood
29 chr11:104903400-104906200 Active TSS Primary T cells fromperipheralblood blood
30 chr11:104903400-104906400 Active TSS Right Atrium heart
31 chr11:104903600-104905200 Flanking Active TSS Primary T cells from cord blood blood
32 chr11:104903600-104906200 Active TSS Brain Hippocampus Middle brain
33 chr11:104903800-104904400 Flanking Active TSS Breast Myoepithelial Primary Cells Breast
34 chr11:104903800-104904400 Transcr. at gene 5' and 3' Primary B cells from cord blood blood
35 chr11:104903800-104904400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
36 chr11:104903800-104904400 Flanking Active TSS NHLF lung
37 chr11:104903800-104905200 Enhancers Stomach Mucosa stomach
38 chr11:104904000-104904400 Transcr. at gene 5' and 3' Primary hematopoietic stem cells blood
39 chr11:104904000-104904400 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
40 chr11:104904000-104904400 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
41 chr11:104904000-104904400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr11:104904000-104904400 Enhancers Foreskin Melanocyte Primary Cells skin01 Skin
43 chr11:104904000-104904400 Flanking Active TSS Primary mononuclear cells fromperipheralblood Blood
44 chr11:104904000-104904400 Flanking Active TSS Adipose Nuclei Adipose
45 chr11:104904000-104904400 Flanking Active TSS Duodenum Mucosa Duodenum
46 chr11:104904000-104904400 Flanking Active TSS Fetal Intestine Small intestine
47 chr11:104904000-104904400 Flanking Active TSS Hela-S3 cervix
48 chr11:104904000-104904600 Enhancers Primary hematopoietic stem cells short term culture blood
49 chr11:104904000-104904600 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
50 chr11:104904000-104904600 Flanking Active TSS Fetal Intestine Large intestine

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015