The 2.0 version of rSNPBase

Variant report

Variant rs558315
Chromosome Location chr11:104907164-104907165
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:104899600-104909200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr11:104904400-104914200 Weak transcription Spleen Spleen
3 chr11:104905800-104911400 Weak transcription Small Intestine intestine
4 chr11:104906000-104907200 Enhancers Sigmoid Colon Sigmoid Colon
5 chr11:104906000-104908200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
6 chr11:104906000-104908400 Weak transcription Lung lung
7 chr11:104906000-104914200 Weak transcription Right Ventricle heart
8 chr11:104906000-104914600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr11:104906200-104907200 Enhancers Breast Myoepithelial Primary Cells Breast
10 chr11:104906200-104907200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr11:104906200-104910200 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr11:104906200-104913600 Weak transcription NHLF lung
13 chr11:104906200-104914200 Weak transcription Ovary ovary
14 chr11:104906200-104914400 Weak transcription Left Ventricle heart
15 chr11:104906400-104907200 Enhancers Primary T helper naive cells from peripheral blood blood
16 chr11:104906400-104907400 Enhancers Adipose Nuclei Adipose
17 chr11:104906400-104910400 Weak transcription HUVEC blood vessel
18 chr11:104906400-104911600 Weak transcription Rectal Smooth Muscle rectum
19 chr11:104906400-104914200 Weak transcription Stomach Mucosa stomach
20 chr11:104906400-104914200 Weak transcription GM12878-XiMat blood
21 chr11:104906600-104907200 Enhancers Primary neutrophils fromperipheralblood blood
22 chr11:104906600-104908200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr11:104906600-104908400 Weak transcription Primary T cells from cord blood blood
24 chr11:104906600-104908800 Enhancers Primary monocytes fromperipheralblood blood
25 chr11:104906600-104910200 Weak transcription Primary hematopoietic stem cells blood
26 chr11:104906600-104911400 Weak transcription Placenta Placenta
27 chr11:104906600-104911400 Weak transcription HepG2 liver
28 chr11:104906600-104911600 Weak transcription Primary T killer naive cells fromperipheralblood blood
29 chr11:104906600-104911600 Weak transcription Fetal Lung lung
30 chr11:104906600-104912200 Weak transcription Hela-S3 cervix
31 chr11:104906600-104914200 Weak transcription Colonic Mucosa Colon
32 chr11:104906600-104915600 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr11:104906800-104908000 Weak transcription Fetal Intestine Small intestine
34 chr11:104906800-104908400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
35 chr11:104906800-104908600 Weak transcription Primary B cells from cord blood blood
36 chr11:104906800-104908600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
37 chr11:104906800-104908800 Weak transcription Primary T regulatory cells fromperipheralblood blood
38 chr11:104906800-104909200 Weak transcription Primary B cells from peripheral blood blood
39 chr11:104906800-104909400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr11:104906800-104910000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr11:104906800-104910000 Weak transcription Primary T cells fromperipheralblood blood
42 chr11:104906800-104910000 Weak transcription Primary T helper cells PMA-I stimulated --
43 chr11:104906800-104910000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr11:104906800-104910200 Weak transcription Primary T helper cells fromperipheralblood blood
45 chr11:104906800-104910400 Weak transcription Dnd41 blood
46 chr11:104906800-104910600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
47 chr11:104906800-104910800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
48 chr11:104906800-104911200 Weak transcription Primary hematopoietic stem cells short term culture blood
49 chr11:104906800-104911400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
50 chr11:104906800-104911400 Weak transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015