The 2.0 version of rSNPBase

Variant report

Variant rs518993
Chromosome Location chr11:104909970-104909971
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:104904400-104914200 Weak transcription Spleen Spleen
2 chr11:104905800-104911400 Weak transcription Small Intestine intestine
3 chr11:104906000-104914200 Weak transcription Right Ventricle heart
4 chr11:104906000-104914600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr11:104906200-104910200 Weak transcription Rectal Mucosa Donor 29 rectum
6 chr11:104906200-104913600 Weak transcription NHLF lung
7 chr11:104906200-104914200 Weak transcription Ovary ovary
8 chr11:104906200-104914400 Weak transcription Left Ventricle heart
9 chr11:104906400-104910400 Weak transcription HUVEC blood vessel
10 chr11:104906400-104911600 Weak transcription Rectal Smooth Muscle rectum
11 chr11:104906400-104914200 Weak transcription Stomach Mucosa stomach
12 chr11:104906400-104914200 Weak transcription GM12878-XiMat blood
13 chr11:104906600-104910200 Weak transcription Primary hematopoietic stem cells blood
14 chr11:104906600-104911400 Weak transcription Placenta Placenta
15 chr11:104906600-104911400 Weak transcription HepG2 liver
16 chr11:104906600-104911600 Weak transcription Primary T killer naive cells fromperipheralblood blood
17 chr11:104906600-104911600 Weak transcription Fetal Lung lung
18 chr11:104906600-104912200 Weak transcription Hela-S3 cervix
19 chr11:104906600-104914200 Weak transcription Colonic Mucosa Colon
20 chr11:104906600-104915600 Weak transcription Skeletal Muscle Female skeletal muscle
21 chr11:104906800-104910000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr11:104906800-104910000 Weak transcription Primary T cells fromperipheralblood blood
23 chr11:104906800-104910000 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr11:104906800-104910000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
25 chr11:104906800-104910200 Weak transcription Primary T helper cells fromperipheralblood blood
26 chr11:104906800-104910400 Weak transcription Dnd41 blood
27 chr11:104906800-104910600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
28 chr11:104906800-104910800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr11:104906800-104911200 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr11:104906800-104911400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
31 chr11:104906800-104911400 Weak transcription Duodenum Mucosa Duodenum
32 chr11:104906800-104911600 Weak transcription Primary T helper naive cells fromperipheralblood blood
33 chr11:104906800-104913800 Weak transcription Rectal Mucosa Donor 31 rectum
34 chr11:104907000-104912000 Weak transcription Primary T killer memory cells from peripheral blood blood
35 chr11:104907200-104910200 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr11:104907200-104911400 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr11:104907200-104913600 Weak transcription Breast Myoepithelial Primary Cells Breast
38 chr11:104907600-104910200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
39 chr11:104908000-104910800 Strong transcription Primary neutrophils fromperipheralblood blood
40 chr11:104908400-104912600 Strong transcription Primary T cells from cord blood blood
41 chr11:104908600-104912200 Strong transcription Primary B cells from cord blood blood
42 chr11:104908600-104912400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
43 chr11:104908800-104911000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
44 chr11:104908800-104911200 Weak transcription Adipose Nuclei Adipose
45 chr11:104908800-104911400 Strong transcription Primary T regulatory cells fromperipheralblood blood
46 chr11:104908800-104911600 Weak transcription Fetal Intestine Small intestine
47 chr11:104908800-104912200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr11:104908800-104914200 Weak transcription Lung lung
49 chr11:104909000-104910200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
50 chr11:104909200-104912200 Strong transcription Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015