The 2.0 version of rSNPBase

Variant report

Variant rs492366
Chromosome Location chr11:104903216-104903217
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:104894000-104903400 Weak transcription GM12878-XiMat blood
2 chr11:104894200-104904200 Weak transcription Stomach Smooth Muscle stomach
3 chr11:104894200-104905600 Weak transcription Esophagus oesophagus
4 chr11:104895000-104904200 Weak transcription Psoas Muscle Psoas
5 chr11:104895800-104904200 Weak transcription Fetal Muscle Leg muscle
6 chr11:104896000-104904200 Weak transcription NHDF-Ad bronchial
7 chr11:104896200-104903800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr11:104896400-104904000 Weak transcription Skeletal Muscle Female skeletal muscle
9 chr11:104897800-104905600 Weak transcription Ovary ovary
10 chr11:104898800-104903800 Weak transcription Stomach Mucosa stomach
11 chr11:104899000-104903800 Weak transcription Hela-S3 cervix
12 chr11:104899200-104905400 Weak transcription Aorta Aorta
13 chr11:104899400-104905400 Weak transcription Fetal Brain Male brain
14 chr11:104899400-104905600 Weak transcription Fetal Muscle Trunk muscle
15 chr11:104899600-104905200 Weak transcription Fetal Adrenal Gland Adrenal Gland
16 chr11:104899600-104909200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr11:104899800-104904200 Weak transcription Fetal Thymus thymus
18 chr11:104899800-104905000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
19 chr11:104900200-104904000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
20 chr11:104900600-104904200 Weak transcription Pancreas Pancrea
21 chr11:104900800-104904200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
22 chr11:104901200-104904000 Weak transcription Colonic Mucosa Colon
23 chr11:104901400-104904000 Weak transcription HMEC breast
24 chr11:104901600-104904000 Weak transcription Fetal Lung lung
25 chr11:104901600-104904600 Weak transcription Placenta Placenta
26 chr11:104901600-104905000 Weak transcription Skeletal Muscle Male skeletal muscle
27 chr11:104902000-104904000 Enhancers Primary T helper 17 cells PMA-I stimulated --
28 chr11:104902000-104904000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
29 chr11:104902000-104905400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr11:104902200-104903400 Weak transcription Primary T cells from cord blood blood
31 chr11:104902200-104903400 Enhancers Primary T helper cells fromperipheralblood blood
32 chr11:104902200-104903400 Weak transcription Adipose Nuclei Adipose
33 chr11:104902200-104903400 Weak transcription Sigmoid Colon Sigmoid Colon
34 chr11:104902200-104903400 Weak transcription Spleen Spleen
35 chr11:104902200-104903400 Weak transcription NHEK skin
36 chr11:104902200-104903600 Weak transcription NHLF lung
37 chr11:104902200-104904000 Weak transcription Primary hematopoietic stem cells short term culture blood
38 chr11:104902200-104904000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr11:104902200-104904000 Weak transcription Liver Liver
40 chr11:104902200-104904200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
41 chr11:104902200-104904200 Weak transcription Left Ventricle heart
42 chr11:104902200-104904200 Weak transcription Lung lung
43 chr11:104902200-104906800 Weak transcription Gastric stomach
44 chr11:104902400-104903800 Active TSS Monocytes-CD14+_RO01746 blood
45 chr11:104902400-104904000 Active TSS Duodenum Mucosa Duodenum
46 chr11:104903000-104903400 Active TSS Primary mononuclear cells fromperipheralblood Blood
47 chr11:104903000-104903600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr11:104903000-104904400 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
49 chr11:104903000-104906000 Active TSS Primary monocytes fromperipheralblood blood
50 chr11:104903000-104906000 Active TSS Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015