The 2.0 version of rSNPBase

Variant report

Variant rs536909
Chromosome Location chr11:104905316-104905317
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:104894200-104905600 Weak transcription Esophagus oesophagus
2 chr11:104897800-104905600 Weak transcription Ovary ovary
3 chr11:104899200-104905400 Weak transcription Aorta Aorta
4 chr11:104899400-104905400 Weak transcription Fetal Brain Male brain
5 chr11:104899400-104905600 Weak transcription Fetal Muscle Trunk muscle
6 chr11:104899600-104909200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr11:104902000-104905400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
8 chr11:104902200-104906800 Weak transcription Gastric stomach
9 chr11:104903000-104906000 Active TSS Primary monocytes fromperipheralblood blood
10 chr11:104903000-104906000 Active TSS Duodenum Smooth Muscle Duodenum
11 chr11:104903200-104906200 Active TSS Rectal Mucosa Donor 29 rectum
12 chr11:104903200-104906200 Flanking Active TSS Dnd41 blood
13 chr11:104903200-104906400 Active TSS Rectal Smooth Muscle rectum
14 chr11:104903400-104906000 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
15 chr11:104903400-104906000 Active TSS GM12878-XiMat blood
16 chr11:104903400-104906200 Active TSS Primary T cells fromperipheralblood blood
17 chr11:104903400-104906400 Active TSS Right Atrium heart
18 chr11:104903600-104906200 Active TSS Brain Hippocampus Middle brain
19 chr11:104904000-104905800 Active TSS Colonic Mucosa Colon
20 chr11:104904000-104906000 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
21 chr11:104904000-104906200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
22 chr11:104904200-104905400 Flanking Active TSS Primary B cells from peripheral blood blood
23 chr11:104904200-104905400 Flanking Active TSS HMEC breast
24 chr11:104904200-104906000 Active TSS Brain Anterior Caudate brain
25 chr11:104904200-104906000 Active TSS Colon Smooth Muscle Colon
26 chr11:104904200-104906200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
27 chr11:104904200-104906200 Active TSS Brain Cingulate Gyrus brain
28 chr11:104904200-104906200 Active TSS Stomach Smooth Muscle stomach
29 chr11:104904400-104905400 Active TSS Fetal Lung lung
30 chr11:104904400-104905400 Weak transcription Right Ventricle heart
31 chr11:104904400-104905600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr11:104904400-104905800 Active TSS Rectal Mucosa Donor 31 rectum
33 chr11:104904400-104905800 Active TSS Skeletal Muscle Female skeletal muscle
34 chr11:104904400-104906000 Active TSS Breast Myoepithelial Primary Cells Breast
35 chr11:104904400-104906000 Active TSS Primary Natural Killer cells fromperipheralblood blood
36 chr11:104904400-104906000 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
37 chr11:104904400-104906000 Active TSS Duodenum Mucosa Duodenum
38 chr11:104904400-104906000 Active TSS Fetal Intestine Small intestine
39 chr11:104904400-104906000 Active TSS Lung lung
40 chr11:104904400-104906200 Active TSS Primary T killer memory cells from peripheral blood blood
41 chr11:104904400-104906200 Active TSS Fetal Muscle Leg muscle
42 chr11:104904400-104906200 Active TSS Left Ventricle heart
43 chr11:104904400-104906400 Flanking Active TSS Primary B cells from cord blood blood
44 chr11:104904400-104914200 Weak transcription Spleen Spleen
45 chr11:104904600-104905800 Active TSS Placenta Placenta
46 chr11:104904600-104906000 Active TSS Primary T helper 17 cells PMA-I stimulated --
47 chr11:104904600-104906000 Active TSS Brain Substantia Nigra brain
48 chr11:104904600-104906000 Active TSS Fetal Intestine Large intestine
49 chr11:104904600-104906200 Active TSS Primary T helper memory cells from peripheral blood 1 blood
50 chr11:104904600-104906200 Active TSS Brain Angular Gyrus brain

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Last update: Aug 31, 2015