The 2.0 version of rSNPBase

Variant report

Variant rs572687
Chromosome Location chr11:104903719-104903720
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:76 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:104894200-104904200 Weak transcription Stomach Smooth Muscle stomach
2 chr11:104894200-104905600 Weak transcription Esophagus oesophagus
3 chr11:104895000-104904200 Weak transcription Psoas Muscle Psoas
4 chr11:104895800-104904200 Weak transcription Fetal Muscle Leg muscle
5 chr11:104896000-104904200 Weak transcription NHDF-Ad bronchial
6 chr11:104896200-104903800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr11:104896400-104904000 Weak transcription Skeletal Muscle Female skeletal muscle
8 chr11:104897800-104905600 Weak transcription Ovary ovary
9 chr11:104898800-104903800 Weak transcription Stomach Mucosa stomach
10 chr11:104899000-104903800 Weak transcription Hela-S3 cervix
11 chr11:104899200-104905400 Weak transcription Aorta Aorta
12 chr11:104899400-104905400 Weak transcription Fetal Brain Male brain
13 chr11:104899400-104905600 Weak transcription Fetal Muscle Trunk muscle
14 chr11:104899600-104905200 Weak transcription Fetal Adrenal Gland Adrenal Gland
15 chr11:104899600-104909200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
16 chr11:104899800-104904200 Weak transcription Fetal Thymus thymus
17 chr11:104899800-104905000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr11:104900200-104904000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
19 chr11:104900600-104904200 Weak transcription Pancreas Pancrea
20 chr11:104900800-104904200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
21 chr11:104901200-104904000 Weak transcription Colonic Mucosa Colon
22 chr11:104901400-104904000 Weak transcription HMEC breast
23 chr11:104901600-104904000 Weak transcription Fetal Lung lung
24 chr11:104901600-104904600 Weak transcription Placenta Placenta
25 chr11:104901600-104905000 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr11:104902000-104904000 Enhancers Primary T helper 17 cells PMA-I stimulated --
27 chr11:104902000-104904000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
28 chr11:104902000-104905400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr11:104902200-104904000 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr11:104902200-104904000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr11:104902200-104904000 Weak transcription Liver Liver
32 chr11:104902200-104904200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr11:104902200-104904200 Weak transcription Left Ventricle heart
34 chr11:104902200-104904200 Weak transcription Lung lung
35 chr11:104902200-104906800 Weak transcription Gastric stomach
36 chr11:104902400-104903800 Active TSS Monocytes-CD14+_RO01746 blood
37 chr11:104902400-104904000 Active TSS Duodenum Mucosa Duodenum
38 chr11:104903000-104904400 Flanking Active TSS Primary T helper memory cells from peripheral blood 2 blood
39 chr11:104903000-104906000 Active TSS Primary monocytes fromperipheralblood blood
40 chr11:104903000-104906000 Active TSS Duodenum Smooth Muscle Duodenum
41 chr11:104903200-104903800 Active TSS Breast Myoepithelial Primary Cells Breast
42 chr11:104903200-104903800 Flanking Active TSS Primary B cells from cord blood blood
43 chr11:104903200-104903800 Enhancers Primary B cells from peripheral blood blood
44 chr11:104903200-104903800 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
45 chr11:104903200-104903800 Transcr. at gene 5' and 3' Primary Natural Killer cells fromperipheralblood blood
46 chr11:104903200-104904000 Active TSS Primary hematopoietic stem cells blood
47 chr11:104903200-104904000 Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
48 chr11:104903200-104904200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr11:104903200-104904400 Flanking Active TSS Primary T helper naive cells from peripheral blood blood
50 chr11:104903200-104904400 Flanking Active TSS Primary T killer memory cells from peripheral blood blood

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Last update: Aug 31, 2015