The 2.0 version of rSNPBase

Variant report

Variant rs546449
Chromosome Location chr11:104911354-104911355
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:104904400-104914200 Weak transcription Spleen Spleen
2 chr11:104905800-104911400 Weak transcription Small Intestine intestine
3 chr11:104906000-104914200 Weak transcription Right Ventricle heart
4 chr11:104906000-104914600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
5 chr11:104906200-104913600 Weak transcription NHLF lung
6 chr11:104906200-104914200 Weak transcription Ovary ovary
7 chr11:104906200-104914400 Weak transcription Left Ventricle heart
8 chr11:104906400-104911600 Weak transcription Rectal Smooth Muscle rectum
9 chr11:104906400-104914200 Weak transcription Stomach Mucosa stomach
10 chr11:104906400-104914200 Weak transcription GM12878-XiMat blood
11 chr11:104906600-104911400 Weak transcription Placenta Placenta
12 chr11:104906600-104911400 Weak transcription HepG2 liver
13 chr11:104906600-104911600 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr11:104906600-104911600 Weak transcription Fetal Lung lung
15 chr11:104906600-104912200 Weak transcription Hela-S3 cervix
16 chr11:104906600-104914200 Weak transcription Colonic Mucosa Colon
17 chr11:104906600-104915600 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr11:104906800-104911400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
19 chr11:104906800-104911400 Weak transcription Duodenum Mucosa Duodenum
20 chr11:104906800-104911600 Weak transcription Primary T helper naive cells fromperipheralblood blood
21 chr11:104906800-104913800 Weak transcription Rectal Mucosa Donor 31 rectum
22 chr11:104907000-104912000 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr11:104907200-104911400 Weak transcription Primary T helper naive cells from peripheral blood blood
24 chr11:104907200-104913600 Weak transcription Breast Myoepithelial Primary Cells Breast
25 chr11:104908400-104912600 Strong transcription Primary T cells from cord blood blood
26 chr11:104908600-104912200 Strong transcription Primary B cells from cord blood blood
27 chr11:104908600-104912400 Strong transcription Primary Natural Killer cells fromperipheralblood blood
28 chr11:104908800-104911400 Strong transcription Primary T regulatory cells fromperipheralblood blood
29 chr11:104908800-104911600 Weak transcription Fetal Intestine Small intestine
30 chr11:104908800-104912200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr11:104908800-104914200 Weak transcription Lung lung
32 chr11:104909200-104912200 Strong transcription Primary B cells from peripheral blood blood
33 chr11:104909400-104911400 Strong transcription Primary monocytes fromperipheralblood blood
34 chr11:104909400-104911400 Strong transcription Monocytes-CD14+_RO01746 blood
35 chr11:104909400-104912400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
36 chr11:104910000-104911800 Strong transcription Primary T helper cells PMA-I stimulated --
37 chr11:104910000-104912400 Strong transcription Primary T cells fromperipheralblood blood
38 chr11:104910000-104912400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr11:104910200-104911400 Strong transcription Primary T helper 17 cells PMA-I stimulated --
40 chr11:104910200-104911600 Strong transcription Sigmoid Colon Sigmoid Colon
41 chr11:104910200-104912200 Strong transcription Primary hematopoietic stem cells blood
42 chr11:104910200-104912200 Strong transcription Rectal Mucosa Donor 29 rectum
43 chr11:104910200-104912600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr11:104910200-104915800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
45 chr11:104910400-104911600 Strong transcription Primary T helper cells fromperipheralblood blood
46 chr11:104910400-104912000 Strong transcription Dnd41 blood
47 chr11:104910400-104912600 Strong transcription HUVEC blood vessel
48 chr11:104910600-104911600 Strong transcription Primary T helper memory cells from peripheral blood 1 blood
49 chr11:104910800-104912000 Strong transcription Primary T cells effector/memory enriched fromperipheralblood blood
50 chr11:104910800-104913000 Genic enhancers Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015