The 2.0 version of rSNPBase

Variant report

Variant rs692897
Chromosome Location chr11:104912993-104912994
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:104904400-104914200 Weak transcription Spleen Spleen
2 chr11:104906000-104914200 Weak transcription Right Ventricle heart
3 chr11:104906000-104914600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr11:104906200-104913600 Weak transcription NHLF lung
5 chr11:104906200-104914200 Weak transcription Ovary ovary
6 chr11:104906200-104914400 Weak transcription Left Ventricle heart
7 chr11:104906400-104914200 Weak transcription Stomach Mucosa stomach
8 chr11:104906400-104914200 Weak transcription GM12878-XiMat blood
9 chr11:104906600-104914200 Weak transcription Colonic Mucosa Colon
10 chr11:104906600-104915600 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr11:104906800-104913800 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr11:104907200-104913600 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr11:104908800-104914200 Weak transcription Lung lung
14 chr11:104910200-104915800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr11:104910800-104913000 Genic enhancers Primary neutrophils fromperipheralblood blood
16 chr11:104911400-104913400 Transcr. at gene 5' and 3' Monocytes-CD14+_RO01746 blood
17 chr11:104911600-104913000 Enhancers Primary T helper naive cells fromperipheralblood blood
18 chr11:104912000-104914200 Enhancers Primary T killer memory cells from peripheral blood blood
19 chr11:104912200-104913000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
20 chr11:104912200-104914000 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr11:104912200-104914200 Weak transcription Adipose Nuclei Adipose
22 chr11:104912200-104915600 Weak transcription Placenta Placenta
23 chr11:104912400-104913600 Transcr. at gene 5' and 3' Primary monocytes fromperipheralblood blood
24 chr11:104912400-104913800 Enhancers Primary T helper memory cells from peripheral blood 2 blood
25 chr11:104912400-104914200 Weak transcription Rectal Smooth Muscle rectum
26 chr11:104912400-104915800 Weak transcription HepG2 liver
27 chr11:104912600-104913000 Enhancers Primary T regulatory cells fromperipheralblood blood
28 chr11:104912600-104913000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
29 chr11:104912600-104913000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
30 chr11:104912600-104913000 Enhancers Dnd41 blood
31 chr11:104912600-104913200 Enhancers Primary hematopoietic stem cells blood
32 chr11:104912600-104913600 Weak transcription Primary T cells fromperipheralblood blood
33 chr11:104912600-104913600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr11:104912600-104913800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr11:104912600-104913800 Enhancers Primary T helper naive cells from peripheral blood blood
36 chr11:104912600-104913800 Enhancers Primary T helper cells fromperipheralblood blood
37 chr11:104912600-104913800 Weak transcription Fetal Lung lung
38 chr11:104912600-104913800 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr11:104912600-104914000 Weak transcription Duodenum Smooth Muscle Duodenum
40 chr11:104912600-104914200 Weak transcription Primary hematopoietic stem cells short term culture blood
41 chr11:104912600-104914200 Enhancers Primary T helper 17 cells PMA-I stimulated --
42 chr11:104912600-104914200 Weak transcription Small Intestine intestine
43 chr11:104912600-104917800 Weak transcription ES-I3 Cell Line embryonic stem cell
44 chr11:104912600-104920800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr11:104912800-104913000 Enhancers Primary T cells from cord blood blood
46 chr11:104912800-104913000 Enhancers Primary mononuclear cells fromperipheralblood Blood
47 chr11:104912800-104913000 Flanking Active TSS Duodenum Mucosa Duodenum
48 chr11:104912800-104913600 Weak transcription Primary B cells from peripheral blood blood
49 chr11:104912800-104913600 Weak transcription Hela-S3 cervix
50 chr11:104912800-104913600 Enhancers HUVEC blood vessel

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Last update: Aug 31, 2015