The 2.0 version of rSNPBase

Variant report

Variant rs516286
Chromosome Location chr11:104894171-104894172
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:104887600-104896800 Weak transcription Placenta Placenta
2 chr11:104892600-104896400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
3 chr11:104892800-104894400 Weak transcription Breast Myoepithelial Primary Cells Breast
4 chr11:104892800-104896400 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr11:104893200-104894400 Flanking Active TSS Primary neutrophils fromperipheralblood blood
6 chr11:104893200-104894400 Enhancers Primary T helper cells fromperipheralblood blood
7 chr11:104893200-104894600 Flanking Active TSS Monocytes-CD14+_RO01746 blood
8 chr11:104893200-104894800 Weak transcription Primary T cells fromperipheralblood blood
9 chr11:104893200-104894800 Enhancers Primary hematopoietic stem cells blood
10 chr11:104893200-104894800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
11 chr11:104893200-104894800 Enhancers Fetal Intestine Small intestine
12 chr11:104893200-104895400 Enhancers Primary B cells from peripheral blood blood
13 chr11:104893200-104896000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
14 chr11:104893400-104894200 Flanking Active TSS Primary B cells from cord blood blood
15 chr11:104893400-104895200 Enhancers Sigmoid Colon Sigmoid Colon
16 chr11:104893400-104895600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr11:104893600-104894400 Enhancers Primary hematopoietic stem cells short term culture blood
18 chr11:104893600-104895400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
19 chr11:104893600-104896400 Weak transcription Primary T regulatory cells fromperipheralblood blood
20 chr11:104893600-104898800 Weak transcription NHLF lung
21 chr11:104893800-104894200 Enhancers Dnd41 blood
22 chr11:104893800-104895600 Weak transcription Duodenum Mucosa Duodenum
23 chr11:104893800-104895800 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr11:104893800-104896400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
25 chr11:104893800-104897800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
26 chr11:104893800-104899200 Weak transcription Fetal Lung lung
27 chr11:104893800-104899800 Weak transcription Colonic Mucosa Colon
28 chr11:104893800-104900200 Weak transcription Rectal Smooth Muscle rectum
29 chr11:104894000-104894200 Enhancers Rectal Mucosa Donor 29 rectum
30 chr11:104894000-104894800 Enhancers Primary monocytes fromperipheralblood blood
31 chr11:104894000-104895400 Enhancers Rectal Mucosa Donor 31 rectum
32 chr11:104894000-104895600 Weak transcription Adipose Nuclei Adipose
33 chr11:104894000-104895600 Weak transcription Lung lung
34 chr11:104894000-104896000 Enhancers Fetal Intestine Large intestine
35 chr11:104894000-104896200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr11:104894000-104896200 Weak transcription Primary T cells from cord blood blood
37 chr11:104894000-104896600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
38 chr11:104894000-104896800 Weak transcription Ovary ovary
39 chr11:104894000-104898400 Weak transcription Stomach Mucosa stomach
40 chr11:104894000-104903400 Weak transcription GM12878-XiMat blood

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Last update: Aug 31, 2015