The 2.0 version of rSNPBase

Variant report

Variant rs516255
Chromosome Location chr11:104902878-104902879
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:74 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:104894000-104903400 Weak transcription GM12878-XiMat blood
2 chr11:104894200-104904200 Weak transcription Stomach Smooth Muscle stomach
3 chr11:104894200-104905600 Weak transcription Esophagus oesophagus
4 chr11:104894800-104903200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
5 chr11:104895000-104904200 Weak transcription Psoas Muscle Psoas
6 chr11:104895800-104904200 Weak transcription Fetal Muscle Leg muscle
7 chr11:104896000-104904200 Weak transcription NHDF-Ad bronchial
8 chr11:104896200-104903800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr11:104896400-104904000 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr11:104896600-104903000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
11 chr11:104897800-104905600 Weak transcription Ovary ovary
12 chr11:104898800-104903800 Weak transcription Stomach Mucosa stomach
13 chr11:104899000-104903800 Weak transcription Hela-S3 cervix
14 chr11:104899200-104905400 Weak transcription Aorta Aorta
15 chr11:104899400-104905400 Weak transcription Fetal Brain Male brain
16 chr11:104899400-104905600 Weak transcription Fetal Muscle Trunk muscle
17 chr11:104899600-104905200 Weak transcription Fetal Adrenal Gland Adrenal Gland
18 chr11:104899600-104909200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
19 chr11:104899800-104904200 Weak transcription Fetal Thymus thymus
20 chr11:104899800-104905000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr11:104900200-104904000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr11:104900600-104904200 Weak transcription Pancreas Pancrea
23 chr11:104900800-104903200 Weak transcription Rectal Smooth Muscle rectum
24 chr11:104900800-104904200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr11:104901200-104904000 Weak transcription Colonic Mucosa Colon
26 chr11:104901400-104904000 Weak transcription HMEC breast
27 chr11:104901600-104904000 Weak transcription Fetal Lung lung
28 chr11:104901600-104904600 Weak transcription Placenta Placenta
29 chr11:104901600-104905000 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr11:104902000-104903000 Transcr. at gene 5' and 3' Primary monocytes fromperipheralblood blood
31 chr11:104902000-104903200 Weak transcription Breast Myoepithelial Primary Cells Breast
32 chr11:104902000-104904000 Enhancers Primary T helper 17 cells PMA-I stimulated --
33 chr11:104902000-104904000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr11:104902000-104905400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
35 chr11:104902200-104903000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
36 chr11:104902200-104903000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
37 chr11:104902200-104903000 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr11:104902200-104903200 Weak transcription Primary B cells from peripheral blood blood
39 chr11:104902200-104903200 Active TSS Primary T cells fromperipheralblood blood
40 chr11:104902200-104903200 Enhancers Primary T helper naive cells from peripheral blood blood
41 chr11:104902200-104903200 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr11:104902200-104903200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
43 chr11:104902200-104903200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
44 chr11:104902200-104903200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr11:104902200-104903200 Weak transcription Fetal Intestine Large intestine
46 chr11:104902200-104903200 Weak transcription Fetal Intestine Small intestine
47 chr11:104902200-104903200 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr11:104902200-104903200 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr11:104902200-104903200 Weak transcription Small Intestine intestine
50 chr11:104902200-104903400 Weak transcription Primary T cells from cord blood blood

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Last update: Aug 31, 2015