The 2.0 version of rSNPBase

Variant report

Variant rs1503391
Chromosome Location chr11:104912458-104912459
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:57 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:104904400-104914200 Weak transcription Spleen Spleen
2 chr11:104906000-104914200 Weak transcription Right Ventricle heart
3 chr11:104906000-104914600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr11:104906200-104913600 Weak transcription NHLF lung
5 chr11:104906200-104914200 Weak transcription Ovary ovary
6 chr11:104906200-104914400 Weak transcription Left Ventricle heart
7 chr11:104906400-104914200 Weak transcription Stomach Mucosa stomach
8 chr11:104906400-104914200 Weak transcription GM12878-XiMat blood
9 chr11:104906600-104914200 Weak transcription Colonic Mucosa Colon
10 chr11:104906600-104915600 Weak transcription Skeletal Muscle Female skeletal muscle
11 chr11:104906800-104913800 Weak transcription Rectal Mucosa Donor 31 rectum
12 chr11:104907200-104913600 Weak transcription Breast Myoepithelial Primary Cells Breast
13 chr11:104908400-104912600 Strong transcription Primary T cells from cord blood blood
14 chr11:104908800-104914200 Weak transcription Lung lung
15 chr11:104910200-104912600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr11:104910200-104915800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
17 chr11:104910400-104912600 Strong transcription HUVEC blood vessel
18 chr11:104910800-104913000 Genic enhancers Primary neutrophils fromperipheralblood blood
19 chr11:104911200-104912600 Strong transcription Primary hematopoietic stem cells short term culture blood
20 chr11:104911400-104912600 Genic enhancers Primary T helper naive cells from peripheral blood blood
21 chr11:104911400-104912600 Genic enhancers Primary T regulatory cells fromperipheralblood blood
22 chr11:104911400-104912600 Enhancers Small Intestine intestine
23 chr11:104911400-104913400 Transcr. at gene 5' and 3' Monocytes-CD14+_RO01746 blood
24 chr11:104911600-104912600 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
25 chr11:104911600-104912600 Genic enhancers Primary T helper cells fromperipheralblood blood
26 chr11:104911600-104912600 Strong transcription Fetal Lung lung
27 chr11:104911600-104912800 Genic enhancers Primary T killer naive cells fromperipheralblood blood
28 chr11:104911600-104912800 Enhancers Fetal Intestine Large intestine
29 chr11:104911600-104912800 Enhancers Fetal Intestine Small intestine
30 chr11:104911600-104913000 Enhancers Primary T helper naive cells fromperipheralblood blood
31 chr11:104912000-104912600 Genic enhancers Primary T cells effector/memory enriched fromperipheralblood blood
32 chr11:104912000-104912600 Genic enhancers Dnd41 blood
33 chr11:104912000-104914200 Enhancers Primary T killer memory cells from peripheral blood blood
34 chr11:104912200-104912600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr11:104912200-104912600 Genic enhancers Primary B cells from cord blood blood
36 chr11:104912200-104912600 Genic enhancers Primary hematopoietic stem cells blood
37 chr11:104912200-104912600 Strong transcription Sigmoid Colon Sigmoid Colon
38 chr11:104912200-104912800 Genic enhancers Primary B cells from peripheral blood blood
39 chr11:104912200-104913000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
40 chr11:104912200-104914000 Weak transcription Rectal Mucosa Donor 29 rectum
41 chr11:104912200-104914200 Weak transcription Adipose Nuclei Adipose
42 chr11:104912200-104915600 Weak transcription Placenta Placenta
43 chr11:104912400-104912600 Enhancers ES-I3 Cell Line embryonic stem cell
44 chr11:104912400-104912600 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
45 chr11:104912400-104912600 Genic enhancers Primary T cells fromperipheralblood blood
46 chr11:104912400-104912600 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
47 chr11:104912400-104912600 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
48 chr11:104912400-104912600 Genic enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
49 chr11:104912400-104912600 Genic enhancers Primary mononuclear cells fromperipheralblood Blood
50 chr11:104912400-104912600 Weak transcription Colon Smooth Muscle Colon

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Last update: Aug 31, 2015