Variant report
| Variant | rs60463280 |
|---|---|
| Chromosome Location | chr20:25649850-25649851 |
| allele | A/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr20:25605600-25654600 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 2 | chr20:25609200-25653400 | Weak transcription | Brain Substantia Nigra | brain |
| 3 | chr20:25611400-25653200 | Weak transcription | Fetal Intestine Small | intestine |
| 4 | chr20:25616000-25653600 | Weak transcription | Adipose Nuclei | Adipose |
| 5 | chr20:25617000-25650400 | Weak transcription | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 6 | chr20:25617600-25653400 | Weak transcription | Fetal Muscle Trunk | muscle |
| 7 | chr20:25618400-25653600 | Weak transcription | Primary B cells from peripheral blood | blood |
| 8 | chr20:25618400-25653600 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 9 | chr20:25623200-25653600 | Weak transcription | Pancreas | Pancrea |
| 10 | chr20:25625000-25655200 | Weak transcription | Primary T helper memory cells from peripheral blood 1 | blood |
| 11 | chr20:25626400-25653600 | Weak transcription | Fetal Muscle Leg | muscle |
| 12 | chr20:25626800-25654000 | Weak transcription | Gastric | stomach |
| 13 | chr20:25628200-25653600 | Weak transcription | Esophagus | oesophagus |
| 14 | chr20:25628800-25653400 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 15 | chr20:25628800-25653400 | Weak transcription | Primary hematopoietic stem cells | blood |
| 16 | chr20:25628800-25653400 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 17 | chr20:25629000-25652200 | Weak transcription | Liver | Liver |
| 18 | chr20:25629000-25653400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 19 | chr20:25629000-25653600 | Weak transcription | Brain Hippocampus Middle | brain |
| 20 | chr20:25629000-25653600 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 21 | chr20:25629000-25653800 | Weak transcription | Duodenum Smooth Muscle | Duodenum |
| 22 | chr20:25629200-25650800 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 23 | chr20:25629400-25650400 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 24 | chr20:25629400-25650400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 25 | chr20:25632600-25653600 | Weak transcription | Brain Anterior Caudate | brain |
| 26 | chr20:25641200-25653800 | Weak transcription | Right Ventricle | heart |
| 27 | chr20:25641600-25653800 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 28 | chr20:25642600-25653400 | Weak transcription | Dnd41 | blood |
| 29 | chr20:25642800-25652200 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 30 | chr20:25643400-25653400 | Weak transcription | A549 | lung |
| 31 | chr20:25648000-25653600 | Weak transcription | Primary T helper cells PMA-I stimulated | -- |
| 32 | chr20:25648000-25653800 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 33 | chr20:25648600-25653400 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 34 | chr20:25649200-25653200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 35 | chr20:25649200-25655200 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
| 36 | chr20:25649400-25650400 | Weak transcription | Fetal Adrenal Gland | Adrenal Gland |
| 37 | chr20:25649400-25653600 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 38 | chr20:25649400-25653800 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 39 | chr20:25649400-25653800 | Weak transcription | Spleen | Spleen |
| 40 | chr20:25649400-25654400 | Weak transcription | Fetal Kidney | kidney |
| 41 | chr20:25649600-25653600 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 42 | chr20:25649600-25653600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 43 | chr20:25649600-25654000 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 44 | chr20:25649800-25650000 | Enhancers | iPS-18 Cell Line | embryonic stem cell |
| 45 | chr20:25649800-25650200 | Weak transcription | Fetal Thymus | thymus |
| 46 | chr20:25649800-25650800 | Enhancers | Colon Smooth Muscle | Colon |
| 47 | chr20:25649800-25653400 | Weak transcription | Thymus | Thymus |
