Variant report

Variant rs8117253
Chromosome Location chr20:25523857-25523858
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25498200-25532200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr20:25517800-25554600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr20:25518800-25524400 Enhancers Fetal Adrenal Gland Adrenal Gland
4 chr20:25518800-25530200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr20:25519400-25524000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr20:25520000-25532000 Weak transcription Dnd41 blood
7 chr20:25520200-25529000 Weak transcription Stomach Mucosa stomach
8 chr20:25520400-25525000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr20:25520600-25527400 Weak transcription Lung lung
10 chr20:25520600-25528800 Weak transcription Gastric stomach
11 chr20:25520800-25524200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
12 chr20:25520800-25524800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
13 chr20:25521000-25530200 Weak transcription Brain Germinal Matrix brain
14 chr20:25521200-25529200 Weak transcription Placenta Placenta
15 chr20:25521200-25530600 Weak transcription Cortex derived primary cultured neurospheres brain
16 chr20:25521400-25524000 Weak transcription HUES64 Cell Line embryonic stem cell
17 chr20:25521400-25524000 Weak transcription Esophagus oesophagus
18 chr20:25521400-25524800 Weak transcription Fetal Kidney kidney
19 chr20:25521400-25525000 Weak transcription iPS-15b Cell Line embryonic stem cell
20 chr20:25521400-25525000 Enhancers Muscle Satellite Cultured Cells --
21 chr20:25521400-25525000 Weak transcription Brain Substantia Nigra brain
22 chr20:25521400-25525000 Weak transcription Fetal Heart heart
23 chr20:25521400-25525000 Weak transcription Fetal Muscle Leg muscle
24 chr20:25521400-25525200 Weak transcription ES-WA7 Cell Line embryonic stem cell
25 chr20:25521400-25525200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
26 chr20:25521400-25525200 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr20:25521400-25525200 Weak transcription Brain Anterior Caudate brain
28 chr20:25521400-25525200 Weak transcription Fetal Stomach stomach
29 chr20:25521400-25525400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
30 chr20:25521400-25525800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr20:25521400-25525800 Weak transcription Brain Hippocampus Middle brain
32 chr20:25521400-25525800 Enhancers Osteobl bone
33 chr20:25521400-25529200 Weak transcription Ovary ovary
34 chr20:25521400-25530000 Weak transcription HSMM muscle
35 chr20:25521400-25532200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
36 chr20:25521400-25534200 Weak transcription Brain Inferior Temporal Lobe brain
37 chr20:25521600-25525000 Weak transcription Stomach Smooth Muscle stomach
38 chr20:25521600-25526000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr20:25521600-25530200 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr20:25521600-25565000 Weak transcription Aorta Aorta
41 chr20:25521800-25525200 Weak transcription iPS-18 Cell Line embryonic stem cell
42 chr20:25522000-25524800 Weak transcription H1 Cell Line embryonic stem cell
43 chr20:25522000-25524800 Weak transcription Fetal Brain Female brain
44 chr20:25522000-25524800 Weak transcription Rectal Smooth Muscle rectum
45 chr20:25522000-25525200 Weak transcription H9 Cell Line embryonic stem cell
46 chr20:25522000-25530000 Weak transcription Colon Smooth Muscle Colon
47 chr20:25522400-25524400 Enhancers NHDF-Ad bronchial
48 chr20:25522400-25526000 Enhancers NHLF lung
49 chr20:25522400-25526400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
50 chr20:25522600-25524400 Weak transcription Fetal Brain Male brain

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