Variant report

Variant	rs73337372
Chromosome Location	chr20:25554851-25554852
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:0)
CpG islands
(count:0)
Chromatin interactive
region (count:8)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

No data

(count:8 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr20:25550297..25552120-chr20:25553741..25555593,3	MCF-7	breast:
2	chr20:25228496..25230155-chr20:25552419..25555224,2	MCF-7	breast:
3	chr20:25552816..25556954-chr20:25564456..25567707,4	MCF-7	breast:
4	chr20:25503491..25506421-chr20:25552111..25554965,2	MCF-7	breast:
5	chr20:25450369..25451319-chr20:25554838..25555706,2	K562	blood:
6	chr20:25450464..25451286-chr20:25554579..25555594,4	MCF-7	breast:
7	chr20:25464605..25465563-chr20:25554811..25555726,5	MCF-7	breast:
8	chr20:25316897..25317523-chr20:25554784..25555668,2	MCF-7	breast:

No data

Variant related genes	Relation type
ENSG00000100994	Chromatin interaction
ENSG00000101004	Chromatin interaction

Extended variants
information (count: 196 )
Associated
traits (count: 9 )

rSNPs within LD-proxies of this variant (count:178)

rs_ID	r²[population]
rs10485776	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1109100	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs1569617	0.82[ASN][1000 genomes]
rs16987767	0.95[EUR][1000 genomes]
rs16987786	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs16987789	0.96[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs16987799	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs16987820	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs16987934	0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1883528	0.94[ASN][1000 genomes]
rs1891771	0.85[EUR][1000 genomes]
rs1936188	0.87[EUR][1000 genomes]
rs1936190	0.85[EUR][1000 genomes]
rs2006249	0.81[ASN][1000 genomes]
rs2103661	0.88[ASN][1000 genomes]
rs2179458	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs242133	0.82[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2424719	0.86[EUR][1000 genomes]
rs2892408	0.94[ASN][1000 genomes]
rs35516971	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs35666277	0.95[EUR][1000 genomes]
rs3813916	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs400070	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs402120	0.86[EUR][1000 genomes]
rs409322	0.82[EUR][1000 genomes]
rs409401	0.86[EUR][1000 genomes]
rs41308623	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs426563	0.86[EUR][1000 genomes]
rs428278	0.86[EUR][1000 genomes]
rs4318454	0.87[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4368405	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs440612	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs447808	0.86[EUR][1000 genomes]
rs4813570	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs4815436	0.94[ASN][1000 genomes]
rs58184048	0.95[EUR][1000 genomes]
rs58877578	0.96[AFR][1000 genomes];0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59324912	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs59399848	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs59546510	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6037128	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6037131	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6037133	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6037159	0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6037161	0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6037164	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6037166	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6037167	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6037168	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6037196	0.90[EUR][1000 genomes]
rs6037204	0.84[EUR][1000 genomes]
rs6037206	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6037222	0.90[EUR][1000 genomes]
rs60394570	0.83[ASN][1000 genomes]
rs60463280	0.82[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6050594	0.95[EUR][1000 genomes]
rs6050597	0.95[EUR][1000 genomes]
rs6050651	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs6050658	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6050663	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6050692	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6050707	0.85[ASN][1000 genomes]
rs6050709	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6050710	0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6050712	0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6050714	0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6050717	0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6050720	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6050723	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6050724	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6050725	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6050726	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6050727	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6050729	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6050730	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6050732	0.81[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6050733	0.82[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6050737	0.85[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6050743	0.87[EUR][1000 genomes]
rs6050745	0.87[EUR][1000 genomes]
rs6050749	0.87[EUR][1000 genomes]
rs6050753	0.85[EUR][1000 genomes]
rs6050754	0.85[EUR][1000 genomes]
rs6050755	0.83[EUR][1000 genomes]
rs6050756	0.85[EUR][1000 genomes]
rs6050767	0.88[AFR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6050770	0.87[AFR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6050801	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6050805	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6050807	0.82[ASN][1000 genomes]
rs6076372	0.88[ASN][1000 genomes]
rs6083886	0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6083896	0.88[ASN][1000 genomes]
rs6083897	0.88[ASN][1000 genomes]
rs6083899	0.88[ASN][1000 genomes]
rs60897995	0.90[EUR][1000 genomes]
rs61052177	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6115220	0.94[ASN][1000 genomes]
rs6115224	0.88[ASN][1000 genomes]
rs6132850	0.94[ASN][1000 genomes]
rs6138608	0.89[ASN][1000 genomes]
rs6138612	0.88[ASN][1000 genomes]
rs6138613	0.85[ASN][1000 genomes]
rs61494938	0.90[EUR][1000 genomes]
rs66467007	1.00[EUR][1000 genomes]
rs66591653	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs66673357	0.95[EUR][1000 genomes]
rs66813885	0.85[EUR][1000 genomes]
rs66927803	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs66940055	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs66983770	0.85[EUR][1000 genomes]
rs67359112	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs67455519	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs67482703	0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs67679582	0.97[EUR][1000 genomes]
rs67680401	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs67921634	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs68149491	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs68165049	0.84[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7260843	0.95[EUR][1000 genomes]
rs7261537	0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7261902	0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7262450	0.95[EUR][1000 genomes]
rs7266130	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7266592	0.98[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7273525	0.95[EUR][1000 genomes]
rs7274550	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73331863	0.95[EUR][1000 genomes]
rs73331878	0.95[EUR][1000 genomes]
rs73333512	0.90[EUR][1000 genomes]
rs73333513	0.95[EUR][1000 genomes]
rs73337339	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs73337343	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs73337346	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs73337349	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs73337355	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73337356	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73337364	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73337366	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73337369	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73337394	0.99[AFR][1000 genomes];0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73337401	0.98[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73339323	0.95[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73339335	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73339360	0.95[AFR][1000 genomes];0.84[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs73339379	0.93[AFR][1000 genomes];0.84[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs73339383	0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs73339387	0.93[AFR][1000 genomes];0.84[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs73341305	0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs73341314	0.93[AFR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs73341328	0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs73341363	0.82[ASN][1000 genomes]
rs73341365	0.88[AFR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs73343275	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs73343292	0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs73345249	0.90[EUR][1000 genomes]
rs73345264	0.87[EUR][1000 genomes]
rs73345278	0.85[EUR][1000 genomes]
rs73345286	0.85[EUR][1000 genomes]
rs7346687	0.83[EUR][1000 genomes]
rs73597810	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs73597811	0.82[ASN][1000 genomes]
rs73597812	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs73597813	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs73614594	0.95[EUR][1000 genomes]
rs742435	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs742436	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs8115484	1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs8115742	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs8117181	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs8117253	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs8120065	0.90[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs8120594	0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs8120972	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs8121013	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs8125002	0.93[AFR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs8126111	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs8126236	0.87[EUR][1000 genomes];0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:18 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1067379	chr20:25355484-25593240	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
2	nsv1060591	chr20:25388781-25628750	ZNF genes & repeats Active TSS Weak transcription Enhancers Flanking Active TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
3	nsv544223	chr20:25388781-25628750	ZNF genes & repeats Strong transcription Enhancers Weak transcription Flanking Active TSS Genic enhancers Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases
4	nsv1067441	chr20:25397566-25615439	Weak transcription Enhancers Active TSS ZNF genes & repeats Strong transcription Genic enhancers Flanking Active TSS Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
5	nsv912828	chr20:25433015-25595175	Weak transcription Enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Strong transcription Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
6	nsv1062452	chr20:25438025-25590278	Weak transcription Active TSS Enhancers Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
7	nsv1066066	chr20:25439367-25588016	Strong transcription Enhancers Weak transcription Transcr. at gene 5' and 3' Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
8	nsv544224	chr20:25439367-25588016	Genic enhancers ZNF genes & repeats Weak transcription Enhancers Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	9 gene(s)	inside rSNPs	diseases
9	nsv912829	chr20:25444242-25595175	Strong transcription Enhancers Weak transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
10	nsv912830	chr20:25449945-25595175	Weak transcription Strong transcription Flanking Active TSS Enhancers ZNF genes & repeats Active TSS Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
11	nsv912831	chr20:25449945-25595868	Weak transcription Enhancers Strong transcription Genic enhancers ZNF genes & repeats Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
12	nsv994976	chr20:25466406-25593286	Weak transcription Flanking Active TSS Enhancers Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
13	nsv534623	chr20:25466406-25593296	Weak transcription Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Active TSS Bivalent Enhancer Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
14	nsv1062765	chr20:25466482-25556751	Enhancers Flanking Active TSS Weak transcription Genic enhancers ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
15	nsv544225	chr20:25466482-25556751	Genic enhancers Weak transcription ZNF genes & repeats Enhancers Strong transcription Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases
16	esv2762069	chr20:25506582-25619528	Weak transcription Active TSS Enhancers Flanking Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	19 gene(s)	inside rSNPs	diseases
17	nsv912832	chr20:25527984-25595175	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Active TSS Strong transcription Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region	8 gene(s)	inside rSNPs	diseases
18	nsv912833	chr20:25539486-25595175	Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	8 gene(s)	inside rSNPs	diseases

mRNA abundance (count:9)

SNP	Gene	Cis/trans	Tissue	Source
rs73337372	ZNF337	cis	Stomach	GTEx
rs73337372	ZNF337	cis	lung	GTEx
rs73337372	RP4-694B14.5	cis	Thyroid	GTEx
rs73337372	NINL	cis	Nerve Tibial	GTEx
rs73337372	ZNF337	cis	Thyroid	GTEx
rs73337372	RP4-694B14.5	cis	Stomach	GTEx
rs73337372	ZNF337	cis	Adipose Subcutaneous	GTEx
rs73337372	RP4-694B14.5	cis	lung	GTEx
rs73337372	RP4-694B14.5	cis	Adipose Subcutaneous	GTEx

Chromatin state (count:69 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:25521600-25565000	Weak transcription	Aorta	Aorta
2	chr20:25524400-25565000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr20:25531200-25559600	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr20:25532600-25559800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
5	chr20:25532600-25565000	Weak transcription	HSMMtube	muscle
6	chr20:25534800-25557600	Weak transcription	Pancreas	Pancrea
7	chr20:25534800-25561400	Weak transcription	Right Atrium	heart
8	chr20:25535000-25560000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
9	chr20:25535000-25561400	Weak transcription	Stomach Smooth Muscle	stomach
10	chr20:25535800-25565000	Weak transcription	Fetal Kidney	kidney
11	chr20:25544600-25565000	Weak transcription	Placenta Amnion	Placenta Amnion
12	chr20:25544800-25559600	Weak transcription	H1 Cell Line	embryonic stem cell
13	chr20:25546000-25559800	Weak transcription	Fetal Muscle Leg	muscle
14	chr20:25546200-25555200	Weak transcription	Fetal Muscle Trunk	muscle
15	chr20:25546400-25559800	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
16	chr20:25546400-25565000	Weak transcription	Cortex derived primary cultured neurospheres	brain
17	chr20:25546600-25559600	Weak transcription	HUES64 Cell Line	embryonic stem cell
18	chr20:25546600-25559800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
19	chr20:25547000-25557600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
20	chr20:25547000-25559600	Weak transcription	HUES6 Cell Line	embryonic stem cell
21	chr20:25547000-25559800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
22	chr20:25548600-25557400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
23	chr20:25548800-25565200	Weak transcription	Esophagus	oesophagus
24	chr20:25549000-25557600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
25	chr20:25549000-25560000	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
26	chr20:25550000-25555600	Strong transcription	Dnd41	blood
27	chr20:25550600-25555200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
28	chr20:25550600-25560000	Weak transcription	HSMM	muscle
29	chr20:25550600-25561200	Weak transcription	Gastric	stomach
30	chr20:25552000-25555000	Enhancers	Ovary	ovary
31	chr20:25552000-25565000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
32	chr20:25552200-25556600	Weak transcription	Fetal Brain Female	brain
33	chr20:25552200-25556800	Weak transcription	Fetal Stomach	stomach
34	chr20:25552200-25557200	Weak transcription	Brain Germinal Matrix	brain
35	chr20:25552200-25557600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
36	chr20:25552200-25564800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
37	chr20:25552800-25557200	Weak transcription	HUES48 Cell Line	embryonic stem cell
38	chr20:25552800-25559600	Weak transcription	H9 Cell Line	embryonic stem cell
39	chr20:25553000-25555000	Enhancers	iPS-15b Cell Line	embryonic stem cell
40	chr20:25553000-25555000	Weak transcription	Stomach Mucosa	stomach
41	chr20:25553000-25555400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
42	chr20:25553000-25556400	Weak transcription	Thymus	Thymus
43	chr20:25553000-25559800	Weak transcription	Fetal Intestine Large	intestine
44	chr20:25553200-25556200	Weak transcription	Fetal Thymus	thymus
45	chr20:25553400-25555400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
46	chr20:25553600-25555400	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
47	chr20:25554000-25555000	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
48	chr20:25554000-25555000	Enhancers	NH-A	brain
49	chr20:25554000-25555200	Enhancers	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
50	chr20:25554000-25555200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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