The 2.0 version of rSNPBase

Variant report

Variant rs6050756
Chromosome Location chr20:25629114-25629115
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:60 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25605400-25630400 Weak transcription Aorta Aorta
2 chr20:25605600-25630200 Weak transcription Fetal Intestine Large intestine
3 chr20:25605600-25635000 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr20:25605600-25654600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr20:25609200-25653400 Weak transcription Brain Substantia Nigra brain
6 chr20:25610200-25630400 Weak transcription Ovary ovary
7 chr20:25610200-25635600 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr20:25610600-25630600 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr20:25611400-25653200 Weak transcription Fetal Intestine Small intestine
10 chr20:25613400-25635000 Weak transcription Hela-S3 cervix
11 chr20:25613600-25635400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr20:25614400-25632400 Weak transcription Osteobl bone
13 chr20:25614600-25635000 Weak transcription NHEK skin
14 chr20:25616000-25653600 Weak transcription Adipose Nuclei Adipose
15 chr20:25617000-25650400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
16 chr20:25617200-25629600 Weak transcription Primary T helper cells fromperipheralblood blood
17 chr20:25617400-25640400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr20:25617600-25653400 Weak transcription Fetal Muscle Trunk muscle
19 chr20:25617800-25635000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr20:25618400-25632200 Weak transcription Primary T cells from cord blood blood
21 chr20:25618400-25653600 Weak transcription Primary B cells from peripheral blood blood
22 chr20:25618400-25653600 Weak transcription Primary hematopoietic stem cells short term culture blood
23 chr20:25623200-25653600 Weak transcription Pancreas Pancrea
24 chr20:25624000-25629200 Weak transcription iPS-15b Cell Line embryonic stem cell
25 chr20:25624000-25635400 Weak transcription HepG2 liver
26 chr20:25624200-25630000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
27 chr20:25624800-25629800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
28 chr20:25624800-25631800 Weak transcription GM12878-XiMat blood
29 chr20:25625000-25655200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr20:25625200-25641600 Weak transcription Dnd41 blood
31 chr20:25625600-25630400 Weak transcription Fetal Adrenal Gland Adrenal Gland
32 chr20:25626400-25630000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr20:25626400-25653600 Weak transcription Fetal Muscle Leg muscle
34 chr20:25626800-25632400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr20:25626800-25634800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
36 chr20:25626800-25654000 Weak transcription Gastric stomach
37 chr20:25627000-25632600 Weak transcription Skeletal Muscle Female skeletal muscle
38 chr20:25627200-25629400 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr20:25627400-25640600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr20:25627600-25629200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr20:25627800-25629600 Strong transcription Breast Myoepithelial Primary Cells Breast
42 chr20:25628000-25629400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
43 chr20:25628200-25653600 Weak transcription Esophagus oesophagus
44 chr20:25628600-25629400 Strong transcription Left Ventricle heart
45 chr20:25628600-25636600 Weak transcription A549 lung
46 chr20:25628800-25630600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr20:25628800-25631400 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr20:25628800-25640600 Weak transcription Fetal Thymus thymus
49 chr20:25628800-25653400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr20:25628800-25653400 Weak transcription Primary hematopoietic stem cells blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015