Variant report

Variant rs73337394
Chromosome Location chr20:25560421-25560422
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25521600-25565000 Weak transcription Aorta Aorta
2 chr20:25524400-25565000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
3 chr20:25532600-25565000 Weak transcription HSMMtube muscle
4 chr20:25534800-25561400 Weak transcription Right Atrium heart
5 chr20:25535000-25561400 Weak transcription Stomach Smooth Muscle stomach
6 chr20:25535800-25565000 Weak transcription Fetal Kidney kidney
7 chr20:25544600-25565000 Weak transcription Placenta Amnion Placenta Amnion
8 chr20:25546400-25565000 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr20:25548800-25565200 Weak transcription Esophagus oesophagus
10 chr20:25550600-25561200 Weak transcription Gastric stomach
11 chr20:25552000-25565000 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr20:25552200-25564800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
13 chr20:25555200-25561200 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr20:25555200-25564800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr20:25555200-25565000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr20:25555200-25565000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
17 chr20:25555400-25561200 Weak transcription Duodenum Smooth Muscle Duodenum
18 chr20:25555400-25565000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr20:25555400-25565000 Weak transcription Brain Anterior Caudate brain
20 chr20:25555400-25565000 Weak transcription NHLF lung
21 chr20:25557000-25565000 Weak transcription Thymus Thymus
22 chr20:25558200-25561400 Weak transcription Pancreas Pancrea
23 chr20:25558200-25565200 Weak transcription Spleen Spleen
24 chr20:25558800-25561200 Strong transcription Fetal Brain Female brain
25 chr20:25559000-25562000 Enhancers Fetal Heart heart
26 chr20:25559400-25560600 Enhancers iPS-15b Cell Line embryonic stem cell
27 chr20:25559400-25560800 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr20:25559600-25560600 Enhancers H1 Cell Line embryonic stem cell
29 chr20:25559600-25560600 Genic enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr20:25559600-25560600 Genic enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
31 chr20:25559600-25560600 Enhancers HUES64 Cell Line embryonic stem cell
32 chr20:25559600-25560600 Genic enhancers Fetal Muscle Trunk muscle
33 chr20:25559600-25561000 Genic enhancers H9 Derived Neuron Cultured Cells ES cell derived
34 chr20:25559600-25561200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr20:25559600-25561400 Genic enhancers ES-UCSF4 Cell Line embryonic stem cell
36 chr20:25559600-25561800 Genic enhancers A549 lung
37 chr20:25559800-25560600 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
38 chr20:25559800-25560600 Genic enhancers Fetal Muscle Leg muscle
39 chr20:25560000-25560600 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr20:25560000-25560600 Genic enhancers iPS-18 Cell Line embryonic stem cell
41 chr20:25560000-25560600 Enhancers Fetal Thymus thymus
42 chr20:25560200-25560600 Weak transcription Fetal Intestine Large intestine
43 chr20:25560200-25561000 Strong transcription Dnd41 blood
44 chr20:25560200-25561400 Genic enhancers Fetal Lung lung
45 chr20:25560200-25565000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
46 chr20:25560400-25560600 Transcr. at gene 5' and 3' HepG2 liver
47 chr20:25560400-25560800 Strong transcription Fetal Intestine Small intestine
48 chr20:25560400-25561000 Weak transcription HUES48 Cell Line embryonic stem cell
49 chr20:25560400-25561000 Weak transcription HUES6 Cell Line embryonic stem cell
50 chr20:25560400-25561000 Weak transcription iPS-20b Cell Line embryonic stem cell

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