Variant report

Variant	rs6814140
Chromosome Location	chr4:100890495-100890496
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr4:100866837..100874072-chr4:100882881..100890630,13	K562	blood:
2	chr4:100889804..100891450-chr4:100891744..100893513,2	K562	blood:
3	chr4:100876921..100880449-chr4:100889880..100893435,3	K562	blood:
4	chr4:100881761..100884128-chr4:100889355..100890930,2	K562	blood:

Variant related genes	Relation type
ENSG00000245322	Chromatin interaction
ENSG00000164031	Chromatin interaction
ENSG00000164032	Chromatin interaction

Extended variants
information (count: 76 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:76)

rs_ID	r²[population]
rs1044044	0.82[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10516458	0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11097679	0.82[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs11097680	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11097681	0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11097682	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11097683	0.98[ASN][1000 genomes]
rs11097685	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11097686	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11723286	0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11736218	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11736750	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11931053	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11931551	0.95[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs11932783	0.88[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11935458	0.83[ASN][1000 genomes]
rs11935615	0.83[ASN][1000 genomes]
rs11936309	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11936580	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11937985	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11938952	0.84[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11939538	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11941520	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11941799	0.83[ASN][1000 genomes]
rs11944405	0.82[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs11944656	0.83[ASN][1000 genomes]
rs11945303	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11947295	0.83[ASN][1000 genomes]
rs17029573	0.83[ASN][1000 genomes]
rs17029662	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs17029673	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17029724	0.94[ASN][1000 genomes]
rs2017707	0.82[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs2070738	0.98[ASN][1000 genomes]
rs2081626	0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2081627	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2276939	0.80[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2866179	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs34453741	0.82[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs3737484	0.82[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs4320141	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4536938	0.83[ASN][1000 genomes]
rs5015717	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs55726736	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs55797991	0.81[ASN][1000 genomes]
rs55888547	0.84[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs56007968	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs56140620	0.90[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs57322716	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58304154	0.83[ASN][1000 genomes]
rs60070547	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs61191235	0.85[ASN][1000 genomes]
rs61203457	0.85[AMR][1000 genomes];0.87[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs62305038	0.83[ASN][1000 genomes]
rs62306101	0.96[ASN][1000 genomes]
rs6532834	0.82[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs6532837	0.86[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6532839	0.94[ASN][1000 genomes]
rs6532840	0.84[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6816635	0.90[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6824513	0.80[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs6829912	0.82[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs6831193	0.83[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs6832726	0.84[AMR][1000 genomes];0.83[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6838495	0.82[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs6842840	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6843247	0.83[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6845556	0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6848666	0.83[ASN][1000 genomes]
rs72686215	0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs732386	0.99[ASN][1000 genomes]
rs73832925	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7660185	0.80[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs7666156	0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7666192	0.95[AFR][1000 genomes];0.85[ASN][1000 genomes]
rs890486	0.82[AMR][1000 genomes];0.92[ASN][1000 genomes]

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:100882800-100892800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
2	chr4:100888800-100893200	Weak transcription	Right Ventricle	heart
3	chr4:100890000-100892600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived

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