Variant report

Variant	rs73326503
Chromosome Location	chr10:99533799-99533800
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:27)

rs_ID	r²[population]
rs11556394	1.00[AMR][1000 genomes]
rs56818599	1.00[AMR][1000 genomes]
rs58090494	1.00[AMR][1000 genomes]
rs59403844	1.00[AMR][1000 genomes]
rs59410931	1.00[AMR][1000 genomes]
rs6584150	1.00[AMR][1000 genomes]
rs7086155	1.00[AMR][1000 genomes]
rs73322513	1.00[AMR][1000 genomes]
rs73322524	1.00[AMR][1000 genomes]
rs73322563	1.00[AMR][1000 genomes]
rs73324603	1.00[AMR][1000 genomes]
rs73324645	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73324684	1.00[AMR][1000 genomes]
rs73324696	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73326520	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73326524	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73332794	1.00[AMR][1000 genomes]
rs73332796	1.00[AMR][1000 genomes]
rs73334504	1.00[AMR][1000 genomes]
rs73334529	1.00[AMR][1000 genomes]
rs73334558	1.00[AMR][1000 genomes]
rs73334560	1.00[AMR][1000 genomes]
rs73334562	1.00[AMR][1000 genomes]
rs73334566	1.00[AMR][1000 genomes]
rs74155508	1.00[AMR][1000 genomes]
rs7914710	1.00[AMR][1000 genomes]
rs7915140	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1817777	chr10:99196035-99558169	Weak transcription Flanking Active TSS Active TSS Enhancers Genic enhancers Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	66 gene(s)	inside rSNPs	diseases
2	nsv467441	chr10:99472710-99541104	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS Bivalent/Poised TSS Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases
3	nsv552026	chr10:99472710-99541104	Weak transcription Enhancers Transcr. at gene 5' and 3' Active TSS Genic enhancers Strong transcription Flanking Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	22 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:99532000-99540200	Weak transcription	Right Atrium	heart
2	chr10:99532800-99533800	Bivalent Enhancer	Duodenum Mucosa	Duodenum
3	chr10:99532800-99541000	Weak transcription	Gastric	stomach
4	chr10:99533000-99534400	Enhancers	HepG2	liver
5	chr10:99533200-99534800	Enhancers	Pancreas	Pancrea
6	chr10:99533400-99533800	Bivalent Enhancer	iPS-15b Cell Line	embryonic stem cell
7	chr10:99533400-99533800	Bivalent Enhancer	iPS-18 Cell Line	embryonic stem cell
8	chr10:99533600-99533800	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr10:99533600-99534000	Enhancers	Fetal Intestine Small	intestine
10	chr10:99533600-99538200	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
11	chr10:99533600-99541400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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