The 2.0 version of rSNPBase

Variant report

Variant rs58090494
Chromosome Location chr10:99380500-99380501
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:55 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:99361800-99392200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr10:99368000-99392200 Weak transcription Osteobl bone
3 chr10:99371000-99392200 Weak transcription Fetal Lung lung
4 chr10:99371600-99381000 Weak transcription HUES64 Cell Line embryonic stem cell
5 chr10:99371600-99392200 Weak transcription HUES48 Cell Line embryonic stem cell
6 chr10:99371600-99392600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
7 chr10:99371800-99381000 Weak transcription K562 blood
8 chr10:99371800-99392200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
9 chr10:99372200-99390600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
10 chr10:99372200-99392400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
11 chr10:99372400-99381600 Weak transcription Colon Smooth Muscle Colon
12 chr10:99372400-99382800 Weak transcription Liver Liver
13 chr10:99372400-99391200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr10:99372400-99392200 Weak transcription NHEK skin
15 chr10:99372400-99392400 Weak transcription ES-I3 Cell Line embryonic stem cell
16 chr10:99372400-99392400 Weak transcription HUES6 Cell Line embryonic stem cell
17 chr10:99372400-99392400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr10:99372600-99380600 Weak transcription iPS-20b Cell Line embryonic stem cell
19 chr10:99372600-99382200 Weak transcription Fetal Brain Male brain
20 chr10:99374200-99392400 Weak transcription Primary hematopoietic stem cells blood
21 chr10:99374600-99392200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr10:99375000-99380800 Weak transcription NHDF-Ad bronchial
23 chr10:99375200-99392200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr10:99376200-99381400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr10:99376200-99391600 Weak transcription Brain Cingulate Gyrus brain
26 chr10:99376400-99382200 Weak transcription Duodenum Smooth Muscle Duodenum
27 chr10:99376400-99392600 Weak transcription Lung lung
28 chr10:99376600-99381000 Weak transcription Brain Hippocampus Middle brain
29 chr10:99376600-99382800 Weak transcription Fetal Intestine Large intestine
30 chr10:99376600-99382800 Weak transcription Fetal Intestine Small intestine
31 chr10:99376600-99392400 Weak transcription Fetal Muscle Trunk muscle
32 chr10:99376800-99392200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr10:99377000-99390600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
34 chr10:99377000-99392400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr10:99377000-99392400 Weak transcription Brain Substantia Nigra brain
36 chr10:99377200-99384200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr10:99377200-99387600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr10:99377200-99392200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
39 chr10:99377400-99390400 Weak transcription Brain Germinal Matrix brain
40 chr10:99377400-99392400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
41 chr10:99378400-99383000 Weak transcription Pancreas Pancrea
42 chr10:99378400-99387000 Weak transcription Fetal Stomach stomach
43 chr10:99378600-99380600 Weak transcription Ovary ovary
44 chr10:99378600-99390600 Weak transcription Fetal Muscle Leg muscle
45 chr10:99378600-99392200 Weak transcription Cortex derived primary cultured neurospheres brain
46 chr10:99378600-99392200 Weak transcription Brain Angular Gyrus brain
47 chr10:99378600-99392400 Weak transcription Brain Anterior Caudate brain
48 chr10:99378600-99392400 Weak transcription Stomach Smooth Muscle stomach
49 chr10:99378800-99391800 Weak transcription Fetal Brain Female brain
50 chr10:99378800-99392400 Weak transcription Brain Inferior Temporal Lobe brain

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Last update: Aug 31, 2015