The 2.0 version of rSNPBase

Variant report

Variant rs59403844
Chromosome Location chr10:99523005-99523006
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr10:99498600-99523600 Strong transcription Primary neutrophils fromperipheralblood blood
2 chr10:99498600-99524800 Weak transcription Fetal Brain Male brain
3 chr10:99499200-99523400 Strong transcription Primary hematopoietic stem cells short term culture blood
4 chr10:99500600-99523200 Strong transcription Brain Germinal Matrix brain
5 chr10:99503000-99524000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr10:99504200-99523600 Strong transcription Fetal Intestine Small intestine
7 chr10:99514800-99526600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr10:99515200-99523200 Strong transcription Lung lung
9 chr10:99515400-99526200 Weak transcription NH-A brain
10 chr10:99517200-99525000 Weak transcription NHDF-Ad bronchial
11 chr10:99519200-99524000 Strong transcription GM12878-XiMat blood
12 chr10:99519600-99523200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
13 chr10:99519800-99523400 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr10:99520000-99523800 Weak transcription Primary B cells from cord blood blood
15 chr10:99520000-99525200 Weak transcription Fetal Lung lung
16 chr10:99520000-99525400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
17 chr10:99520000-99526000 Weak transcription K562 blood
18 chr10:99520000-99527800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
19 chr10:99520200-99523400 Enhancers Brain Inferior Temporal Lobe brain
20 chr10:99520200-99523600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
21 chr10:99520200-99523600 Enhancers Brain Dorsolateral Prefrontal Cortex brain
22 chr10:99520200-99528400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr10:99520400-99524000 Weak transcription Hela-S3 cervix
24 chr10:99520400-99529200 Weak transcription Rectal Smooth Muscle rectum
25 chr10:99520400-99530400 Weak transcription Primary T helper naive cells from peripheral blood blood
26 chr10:99520600-99526600 Weak transcription Osteobl bone
27 chr10:99520600-99528400 Weak transcription Primary hematopoietic stem cells blood
28 chr10:99520800-99525000 Weak transcription HUVEC blood vessel
29 chr10:99520800-99525200 Weak transcription Small Intestine intestine
30 chr10:99521000-99523400 Enhancers Brain Hippocampus Middle brain
31 chr10:99521400-99523400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
32 chr10:99521400-99524200 Weak transcription Placenta Amnion Placenta Amnion
33 chr10:99521600-99524000 Enhancers HSMMtube muscle
34 chr10:99521600-99525000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr10:99521600-99528200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
36 chr10:99521800-99523200 Genic enhancers Fetal Muscle Leg muscle
37 chr10:99521800-99523400 Genic enhancers HSMM muscle
38 chr10:99521800-99526000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
39 chr10:99522000-99523400 Enhancers iPS-18 Cell Line embryonic stem cell
40 chr10:99522000-99523600 Enhancers ES-I3 Cell Line embryonic stem cell
41 chr10:99522000-99524400 Enhancers HepG2 liver
42 chr10:99522000-99524600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
43 chr10:99522000-99524600 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr10:99522000-99525200 Weak transcription Stomach Smooth Muscle stomach
45 chr10:99522000-99526600 Weak transcription Ovary ovary
46 chr10:99522200-99523200 Enhancers Breast Myoepithelial Primary Cells Breast
47 chr10:99522200-99523200 Enhancers Cortex derived primary cultured neurospheres brain
48 chr10:99522200-99523200 Genic enhancers Foreskin Fibroblast Primary Cells skin01 Skin
49 chr10:99522200-99523200 Enhancers Brain Cingulate Gyrus brain
50 chr10:99522200-99523400 Enhancers H1 Cell Line embryonic stem cell

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Last update: Aug 31, 2015