Variant report

Variant	rs73973307
Chromosome Location	chr2:180473188-180473189
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 51 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:51)

rs_ID	r²[population]
rs10048645	0.90[EUR][1000 genomes]
rs10189196	0.84[EUR][1000 genomes]
rs10189808	0.90[EUR][1000 genomes]
rs11683510	0.93[EUR][1000 genomes]
rs11695089	0.93[EUR][1000 genomes]
rs12615265	0.89[EUR][1000 genomes]
rs12615343	0.89[EUR][1000 genomes]
rs12693195	0.90[EUR][1000 genomes]
rs12693196	0.90[EUR][1000 genomes]
rs12986652	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs12987486	0.89[EUR][1000 genomes]
rs12991282	0.90[EUR][1000 genomes]
rs13000199	0.89[EUR][1000 genomes]
rs13001067	0.90[EUR][1000 genomes]
rs13014868	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13026689	0.90[EUR][1000 genomes]
rs13028216	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13029050	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs1515304	0.90[EUR][1000 genomes]
rs1515312	0.90[EUR][1000 genomes]
rs1515313	0.90[EUR][1000 genomes]
rs1515314	0.90[EUR][1000 genomes]
rs1606813	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16866810	0.84[EUR][1000 genomes]
rs16866819	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16866823	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16866832	0.90[EUR][1000 genomes]
rs16866834	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16866857	0.89[EUR][1000 genomes]
rs2176061	0.90[EUR][1000 genomes]
rs2222031	0.90[EUR][1000 genomes]
rs2887110	0.90[EUR][1000 genomes]
rs34313722	0.93[EUR][1000 genomes]
rs34376589	0.90[EUR][1000 genomes]
rs34528783	0.89[EUR][1000 genomes]
rs34545498	0.82[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs34663462	0.87[EUR][1000 genomes]
rs35439427	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs35664499	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs36060902	0.89[EUR][1000 genomes]
rs6721295	0.90[EUR][1000 genomes]
rs71425640	0.85[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7581924	0.87[EUR][1000 genomes]
rs7592221	0.88[EUR][1000 genomes]
rs7593595	0.90[EUR][1000 genomes]
rs7601398	0.89[EUR][1000 genomes]
rs9288040	0.90[EUR][1000 genomes]
rs951427	0.85[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs969231	0.90[EUR][1000 genomes]
rs988289	0.90[EUR][1000 genomes]
rs988290	0.87[EUR][1000 genomes]

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:180471000-180476800	Weak transcription	Fetal Lung	lung
2	chr2:180471200-180477200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
3	chr2:180471800-180474600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
4	chr2:180472000-180477000	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
5	chr2:180473000-180473200	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
6	chr2:180473000-180473400	Enhancers	H1 Cell Line	embryonic stem cell
7	chr2:180473000-180473400	Flanking Active TSS	HUES6 Cell Line	embryonic stem cell
8	chr2:180473000-180473400	Enhancers	iPS-18 Cell Line	embryonic stem cell
9	chr2:180473000-180473600	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr2:180473000-180473600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr2:180473000-180473600	Enhancers	HUES48 Cell Line	embryonic stem cell
12	chr2:180473000-180473600	Enhancers	iPS-15b Cell Line	embryonic stem cell
13	chr2:180473000-180473600	Enhancers	iPS-20b Cell Line	embryonic stem cell
14	chr2:180473000-180474000	Enhancers	HUES64 Cell Line	embryonic stem cell
15	chr2:180473000-180474200	Enhancers	ES-I3 Cell Line	embryonic stem cell

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