Variant report

Variant	rs7702273
Chromosome Location	chr5:35734758-35734759
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 41 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:40)

rs_ID	r²[population]
rs10036879	0.83[AFR][1000 genomes]
rs10038652	1.00[AMR][1000 genomes]
rs10038679	1.00[AMR][1000 genomes]
rs10043797	0.81[AFR][1000 genomes]
rs10044455	0.90[YRI][hapmap]
rs10045110	0.90[YRI][hapmap];1.00[AMR][1000 genomes]
rs10051352	0.84[AFR][1000 genomes]
rs10054231	0.84[AFR][1000 genomes]
rs10056622	1.00[AMR][1000 genomes]
rs10058394	0.90[YRI][hapmap];0.84[AFR][1000 genomes]
rs10060953	1.00[AMR][1000 genomes]
rs10064633	1.00[AMR][1000 genomes]
rs10067721	0.86[AFR][1000 genomes]
rs10068174	0.84[AFR][1000 genomes]
rs10069346	0.88[YRI][hapmap];0.84[AFR][1000 genomes]
rs10069609	0.90[YRI][hapmap];0.89[AFR][1000 genomes]
rs10071844	0.84[AFR][1000 genomes]
rs10071847	0.90[YRI][hapmap];0.84[AFR][1000 genomes]
rs10072859	1.00[AMR][1000 genomes]
rs10077176	0.84[AFR][1000 genomes]
rs10078771	1.00[AMR][1000 genomes]
rs10079960	0.81[AFR][1000 genomes]
rs10080148	1.00[AMR][1000 genomes]
rs12332369	0.88[YRI][hapmap];1.00[AMR][1000 genomes]
rs16902279	1.00[AMR][1000 genomes]
rs2131989	0.81[YRI][hapmap];1.00[AMR][1000 genomes]
rs28562870	0.81[AFR][1000 genomes]
rs6870518	0.90[YRI][hapmap];0.86[AFR][1000 genomes]
rs6877678	1.00[AMR][1000 genomes]
rs6878544	0.84[AFR][1000 genomes]
rs6884516	1.00[AMR][1000 genomes]
rs6893143	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6895275	0.90[YRI][hapmap];1.00[AMR][1000 genomes]
rs7703587	0.90[YRI][hapmap]
rs7714298	0.85[YRI][hapmap];0.84[AFR][1000 genomes]
rs7714839	0.84[AFR][1000 genomes]
rs7715524	0.88[YRI][hapmap];1.00[AMR][1000 genomes]
rs7734377	0.84[AFR][1000 genomes]
rs7735585	0.84[AFR][1000 genomes]
rs9292602	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv525477	chr5:35530905-35792990	Weak transcription Enhancers Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:35734400-35735400	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
2	chr5:35734600-35734800	Enhancers	Lung	lung

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