Variant report

Variant	rs7905991
Chromosome Location	chr10:61361711-61361712
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 55 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs10128218	0.81[ASN][1000 genomes]
rs10733987	0.83[ASN][1000 genomes]
rs10763611	0.85[ASN][1000 genomes]
rs1875148	1.00[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs1875150	0.85[ASN][1000 genomes]
rs1909624	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1909626	1.00[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs1909627	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1909629	1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1909631	0.85[ASN][1000 genomes]
rs1909634	0.85[ASN][1000 genomes]
rs1909636	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs1909637	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs1909640	0.82[JPT][hapmap];0.85[ASN][1000 genomes]
rs1909641	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs2126775	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2169686	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3999577	0.91[ASN][1000 genomes]
rs4948234	0.91[ASN][1000 genomes]
rs4948335	0.85[ASN][1000 genomes]
rs4948336	1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs4948337	0.83[ASN][1000 genomes]
rs4948340	0.89[ASN][1000 genomes]
rs4948341	1.00[ASN][1000 genomes]
rs4948342	0.85[ASN][1000 genomes]
rs6481470	0.94[ASN][1000 genomes]
rs7097223	0.86[ASN][1000 genomes]
rs7098214	0.85[ASN][1000 genomes]
rs7900692	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs7901109	0.97[ASN][1000 genomes]
rs7905405	0.85[ASN][1000 genomes]
rs7908064	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7909725	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7911814	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:21 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv895565	chr10:61347537-61379398	Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases
2	nsv895566	chr10:61350192-61379398	Weak transcription Enhancers Active TSS Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
3	nsv437684	chr10:61354446-61367720	Enhancers Weak transcription	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
4	nsv437683	chr10:61354446-61369980	Weak transcription Enhancers Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
5	nsv1049492	chr10:61357609-61368880	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
6	nsv521848	chr10:61358382-61363824	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
7	esv1807715	chr10:61358382-61364804	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
8	esv1808482	chr10:61358382-61365105	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
9	esv1811958	chr10:61358382-61365105	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
10	nsv818772	chr10:61358382-61365105	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
11	nsv437118	chr10:61358382-61372357	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
12	nsv437119	chr10:61358382-61372357	Enhancers Weak transcription Flanking Active TSS Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
13	nsv467290	chr10:61358382-61378404	Flanking Active TSS Enhancers Weak transcription Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
14	nsv467291	chr10:61358382-61378404	Enhancers Weak transcription Active TSS Flanking Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
15	nsv551151	chr10:61358382-61378404	Weak transcription Flanking Active TSS Enhancers Active TSS	Chromatin interactive region lncRNA	n/a	inside rSNPs	diseases
16	esv3318129	chr10:61359946-61364744	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
17	esv3393279	chr10:61361196-61365994	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
18	nsv821391	chr10:61361337-61365129	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
19	esv3514729	chr10:61361550-61365298	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases
20	esv999013	chr10:61361573-61366692	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases
21	nsv819463	chr10:61361680-61364996	Weak transcription Enhancers	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:61355600-61366800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr10:61361000-61362000	Enhancers	Placenta	Placenta

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