Variant report

Variant	rs931764
Chromosome Location	chr8:49384554-49384555
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr8:49377433..49379551-chr8:49382880..49384650,2	K562	blood:

Extended variants
information (count: 48 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:48)

rs_ID	r²[population]
rs10087280	0.92[AFR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10088243	0.85[AMR][1000 genomes];0.89[ASN][1000 genomes]
rs10092171	0.88[EUR][1000 genomes]
rs10094801	0.84[CEU][hapmap];0.88[JPT][hapmap];0.84[EUR][1000 genomes]
rs10097989	0.86[EUR][1000 genomes]
rs10098707	0.86[AFR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10110147	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10110839	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10112025	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs10113165	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10282993	0.83[AFR][1000 genomes];0.84[EUR][1000 genomes]
rs10957175	0.83[JPT][hapmap]
rs1160606	0.86[EUR][1000 genomes]
rs11774421	0.98[AFR][1000 genomes];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11985324	0.98[AFR][1000 genomes];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11985893	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11992271	0.98[AFR][1000 genomes];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs11995181	0.97[AFR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11997525	0.97[AFR][1000 genomes];0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1393550	0.83[AFR][1000 genomes];0.87[EUR][1000 genomes]
rs16937564	0.97[AFR][1000 genomes];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs16937767	0.86[EUR][1000 genomes]
rs16938118	0.83[JPT][hapmap]
rs1910252	0.97[AFR][1000 genomes];0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1976450	0.85[EUR][1000 genomes]
rs2047787	0.94[AFR][1000 genomes];0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2200083	0.84[JPT][hapmap]
rs2200084	0.89[JPT][hapmap]
rs2384925	0.83[JPT][hapmap]
rs28507516	0.85[EUR][1000 genomes]
rs28516085	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs28689821	0.87[EUR][1000 genomes]
rs2891639	0.87[EUR][1000 genomes]
rs2891641	0.83[JPT][hapmap]
rs4554493	0.92[AFR][1000 genomes];0.95[AMR][1000 genomes];0.92[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs5001149	0.84[CEU][hapmap];0.88[JPT][hapmap];0.84[EUR][1000 genomes]
rs55851597	0.82[EUR][1000 genomes]
rs57846507	0.87[EUR][1000 genomes]
rs6981394	0.85[EUR][1000 genomes]
rs6990833	0.83[JPT][hapmap]
rs6998738	0.85[EUR][1000 genomes]
rs7006329	0.92[AFR][1000 genomes];0.92[AMR][1000 genomes];0.91[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7016759	0.98[AFR][1000 genomes];0.95[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs72639043	0.98[AFR][1000 genomes];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7817656	0.98[AFR][1000 genomes];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7825135	0.97[AFR][1000 genomes];0.97[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs868444	0.84[CEU][hapmap];0.88[JPT][hapmap];0.81[EUR][1000 genomes]
rs970214	0.87[EUR][1000 genomes]

No data

Chromatin state (count:29 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:49379200-49384800	Enhancers	Fetal Adrenal Gland	Adrenal Gland
2	chr8:49380200-49390400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
3	chr8:49380400-49385600	Weak transcription	Placenta	Placenta
4	chr8:49380800-49386400	Weak transcription	Fetal Muscle Leg	muscle
5	chr8:49380800-49386400	Weak transcription	Pancreas	Pancrea
6	chr8:49382000-49384600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
7	chr8:49382200-49387200	Enhancers	HMEC	breast
8	chr8:49382600-49385000	Enhancers	HSMM	muscle
9	chr8:49383000-49384600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr8:49383000-49384600	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
11	chr8:49383000-49384600	Enhancers	Osteobl	bone
12	chr8:49383000-49384800	Enhancers	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
13	chr8:49383000-49385000	Enhancers	Muscle Satellite Cultured Cells	--
14	chr8:49383000-49385200	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr8:49383000-49385200	Enhancers	NHEK	skin
16	chr8:49383000-49386800	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
17	chr8:49383200-49384600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
18	chr8:49383400-49384600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
19	chr8:49383400-49385200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
20	chr8:49383400-49386800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
21	chr8:49383400-49387000	Enhancers	NHDF-Ad	bronchial
22	chr8:49383600-49384600	Enhancers	Fetal Muscle Trunk	muscle
23	chr8:49383600-49386800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
24	chr8:49383800-49385200	Enhancers	Esophagus	oesophagus
25	chr8:49383800-49386000	Weak transcription	NHLF	lung
26	chr8:49384000-49385200	Enhancers	NH-A	brain
27	chr8:49384000-49385800	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
28	chr8:49384200-49385400	Enhancers	Placenta Amnion	Placenta Amnion
29	chr8:49384200-49386000	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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