The 2.0 version of rSNPBase

Variant report

Variant rs10123412
Chromosome Location chr9:96351480-96351481
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:108 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:96340600-96351600 Weak transcription Thymus Thymus
2 chr9:96341400-96356000 Weak transcription Hela-S3 cervix
3 chr9:96341600-96351600 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr9:96341600-96359600 Weak transcription Primary T regulatory cells fromperipheralblood blood
5 chr9:96341800-96362200 Weak transcription Monocytes-CD14+_RO01746 blood
6 chr9:96342200-96359600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr9:96342600-96357800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
8 chr9:96343400-96360600 Weak transcription Dnd41 blood
9 chr9:96344800-96356400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
10 chr9:96345000-96355000 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr9:96345000-96356400 Weak transcription H1 Cell Line embryonic stem cell
12 chr9:96345000-96362600 Weak transcription Primary neutrophils fromperipheralblood blood
13 chr9:96345600-96351600 Weak transcription Fetal Intestine Large intestine
14 chr9:96345600-96351800 Weak transcription Pancreatic Islets Pancreatic Islet
15 chr9:96347400-96352200 Enhancers Psoas Muscle Psoas
16 chr9:96347400-96353800 Enhancers Ovary ovary
17 chr9:96347400-96355400 Enhancers Pancreas Pancrea
18 chr9:96347400-96359000 Enhancers Left Ventricle heart
19 chr9:96347600-96351600 Enhancers Skeletal Muscle Female skeletal muscle
20 chr9:96347600-96352800 Enhancers Gastric stomach
21 chr9:96347600-96353000 Enhancers Lung lung
22 chr9:96347600-96353600 Enhancers Primary T cells fromperipheralblood blood
23 chr9:96347600-96355200 Enhancers Right Atrium heart
24 chr9:96347600-96355600 Enhancers Right Ventricle heart
25 chr9:96347600-96356200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
26 chr9:96347600-96360600 Weak transcription Primary hematopoietic stem cells blood
27 chr9:96348000-96353800 Enhancers Fetal Muscle Trunk muscle
28 chr9:96348200-96354800 Weak transcription Small Intestine intestine
29 chr9:96348400-96354400 Enhancers Brain Hippocampus Middle brain
30 chr9:96348400-96356200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr9:96348400-96360200 Weak transcription Primary B cells from cord blood blood
32 chr9:96348400-96360200 Weak transcription Primary hematopoietic stem cells short term culture blood
33 chr9:96348800-96353400 Enhancers Spleen Spleen
34 chr9:96349000-96352000 Weak transcription Primary T killer naive cells fromperipheralblood blood
35 chr9:96349000-96352000 Weak transcription Fetal Brain Male brain
36 chr9:96349000-96352600 Enhancers Primary T helper cells PMA-I stimulated --
37 chr9:96349000-96352800 Enhancers Primary T helper cells fromperipheralblood blood
38 chr9:96349000-96365800 Weak transcription Rectal Smooth Muscle rectum
39 chr9:96349200-96352600 Weak transcription Brain Germinal Matrix brain
40 chr9:96349200-96353000 Weak transcription Fetal Intestine Small intestine
41 chr9:96349400-96352200 Enhancers Stomach Smooth Muscle stomach
42 chr9:96349400-96356200 Weak transcription A549 lung
43 chr9:96349800-96351800 Enhancers Placenta Placenta
44 chr9:96350000-96351600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
45 chr9:96350000-96351600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
46 chr9:96350000-96352200 Enhancers Esophagus oesophagus
47 chr9:96350000-96352600 Enhancers Stomach Mucosa stomach
48 chr9:96350000-96353000 Enhancers Colon Smooth Muscle Colon
49 chr9:96350000-96355200 Enhancers Primary T helper naive cells fromperipheralblood blood
50 chr9:96350200-96352400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015