The 2.0 version of rSNPBase

Variant report

Variant rs10420034
Chromosome Location chr19:20976268-20976269
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:20959600-20978200 Weak transcription Spleen Spleen
2 chr19:20959800-20978400 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr19:20960000-20976600 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr19:20960000-20977600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr19:20960000-20977600 Weak transcription Brain Hippocampus Middle brain
6 chr19:20960000-20978000 Weak transcription Brain Inferior Temporal Lobe brain
7 chr19:20960000-20978200 Weak transcription Pancreas Pancrea
8 chr19:20960000-20978400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
9 chr19:20960000-20978400 Weak transcription Brain Cingulate Gyrus brain
10 chr19:20960000-20978400 Weak transcription HSMM muscle
11 chr19:20960000-20983800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr19:20960000-20987600 Weak transcription Brain Substantia Nigra brain
13 chr19:20960000-20987800 Weak transcription Placenta Amnion Placenta Amnion
14 chr19:20960200-20979600 Weak transcription Pancreatic Islets Pancreatic Islet
15 chr19:20960200-20979600 Weak transcription NH-A brain
16 chr19:20960200-20987200 Weak transcription Colon Smooth Muscle Colon
17 chr19:20960200-20990400 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr19:20960800-20976600 Weak transcription iPS-15b Cell Line embryonic stem cell
19 chr19:20961200-20989600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
20 chr19:20962400-20978400 Weak transcription Osteobl bone
21 chr19:20966400-20985400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr19:20966800-20978600 Weak transcription Placenta Placenta
23 chr19:20967600-20978200 Weak transcription Primary T killer memory cells from peripheral blood blood
24 chr19:20967800-20978400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
25 chr19:20968000-20977800 Weak transcription Fetal Kidney kidney
26 chr19:20968000-20978400 Weak transcription HepG2 liver
27 chr19:20968200-20978600 Weak transcription Skeletal Muscle Female skeletal muscle
28 chr19:20968400-20976600 Weak transcription HMEC breast
29 chr19:20968400-20978400 Weak transcription Adipose Nuclei Adipose
30 chr19:20968400-20979600 Weak transcription Rectal Smooth Muscle rectum
31 chr19:20968400-20980600 Weak transcription Colonic Mucosa Colon
32 chr19:20968600-20976400 Weak transcription Fetal Lung lung
33 chr19:20968800-20976400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
34 chr19:20968800-20977800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
35 chr19:20968800-20978200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
36 chr19:20968800-20978400 Weak transcription Left Ventricle heart
37 chr19:20969600-20981000 Weak transcription Psoas Muscle Psoas
38 chr19:20970600-20976600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
39 chr19:20970800-20977800 Weak transcription Gastric stomach
40 chr19:20971000-20980600 Weak transcription Muscle Satellite Cultured Cells --
41 chr19:20971200-20976600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
42 chr19:20971600-20976400 Weak transcription Primary T cells fromperipheralblood blood
43 chr19:20971800-20977600 Weak transcription Fetal Muscle Leg muscle
44 chr19:20972000-20976600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr19:20973000-20978200 Weak transcription Fetal Muscle Trunk muscle
46 chr19:20973000-20978200 Weak transcription Rectal Mucosa Donor 29 rectum
47 chr19:20973200-20976400 Weak transcription Primary T helper naive cells fromperipheralblood blood
48 chr19:20974000-20978000 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr19:20974600-20977800 Weak transcription Fetal Thymus thymus
50 chr19:20974600-20978400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow

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Last update: Aug 31, 2015