Variant report

Variant	rs12656194
Chromosome Location	chr5:124221498-124221499
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr5:124177573..124180075-chr5:124221492..124224163,2	K562	blood:
2	chr5:124213962..124215909-chr5:124220454..124222581,2	K562	blood:

Extended variants
information (count: 51 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:51)

rs_ID	r²[population]
rs10038794	0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10041713	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10051446	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10055828	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10058365	0.90[ASN][1000 genomes]
rs10066786	0.83[AMR][1000 genomes];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10070612	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10077638	0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10078386	1.00[CEU][hapmap];1.00[CHB][hapmap];0.91[JPT][hapmap];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1026010	0.89[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10463783	0.81[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs10478645	0.94[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10793807	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11241775	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11241776	0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11241777	0.91[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11241779	0.89[EUR][1000 genomes]
rs11743521	0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs11743554	0.90[EUR][1000 genomes]
rs11951671	0.89[EUR][1000 genomes]
rs11953197	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11958289	0.88[EUR][1000 genomes]
rs12652556	1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12652881	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12652885	0.87[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs12653706	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12654010	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12654041	0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12654479	0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12654486	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12654613	0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12655869	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12655887	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12656060	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12656225	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12657832	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12658154	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs12658172	0.90[ASN][1000 genomes]
rs13359971	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs28375332	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs35862376	0.85[EUR][1000 genomes]
rs36041674	0.90[EUR][1000 genomes];0.80[ASN][1000 genomes]
rs56110557	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs59020249	0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs60775983	0.90[ASN][1000 genomes]
rs62370848	0.92[ASN][1000 genomes]
rs6875370	0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6895765	1.00[CEU][hapmap];0.91[CHB][hapmap];0.91[JPT][hapmap];0.92[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6898265	1.00[CEU][hapmap];0.91[CHB][hapmap];0.91[JPT][hapmap];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs73782503	0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs9327340	0.89[EUR][1000 genomes];0.83[ASN][1000 genomes]

No data

Chromatin state (count:18 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:124209600-124224800	Weak transcription	Fetal Brain Male	brain
2	chr5:124215400-124222600	Weak transcription	Brain Anterior Caudate	brain
3	chr5:124215800-124224800	Weak transcription	Pancreas	Pancrea
4	chr5:124217400-124222200	Weak transcription	Brain Angular Gyrus	brain
5	chr5:124217600-124223400	Weak transcription	Rectal Mucosa Donor 29	rectum
6	chr5:124218400-124223400	Weak transcription	Brain Inferior Temporal Lobe	brain
7	chr5:124218800-124222400	Weak transcription	Brain Hippocampus Middle	brain
8	chr5:124219400-124223800	Weak transcription	Placenta Amnion	Placenta Amnion
9	chr5:124219600-124222200	Weak transcription	Dnd41	blood
10	chr5:124219800-124222600	Weak transcription	Pancreatic Islets	Pancreatic Islet
11	chr5:124220000-124224000	Weak transcription	Fetal Stomach	stomach
12	chr5:124220200-124223000	Weak transcription	Stomach Mucosa	stomach
13	chr5:124220200-124223400	Weak transcription	Duodenum Mucosa	Duodenum
14	chr5:124220400-124222200	Weak transcription	Fetal Intestine Small	intestine
15	chr5:124220400-124222400	Weak transcription	Fetal Intestine Large	intestine
16	chr5:124220400-124222800	Weak transcription	Liver	Liver
17	chr5:124220600-124223000	Weak transcription	Small Intestine	intestine
18	chr5:124221400-124222800	Weak transcription	Fetal Lung	lung

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