The 2.0 version of rSNPBase

Variant report

Variant rs28375332
Chromosome Location chr5:124241010-124241011
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:124223200-124242200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr5:124235200-124242000 Weak transcription NHDF-Ad bronchial
3 chr5:124237000-124243400 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
4 chr5:124237600-124243000 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr5:124237600-124246800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
6 chr5:124238200-124241600 Weak transcription Colon Smooth Muscle Colon
7 chr5:124238200-124241600 Weak transcription HSMM muscle
8 chr5:124238200-124241800 Weak transcription Primary neutrophils fromperipheralblood blood
9 chr5:124238200-124241800 Weak transcription Hela-S3 cervix
10 chr5:124238200-124242000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
11 chr5:124238200-124242200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
12 chr5:124238400-124241400 Weak transcription Brain Germinal Matrix brain
13 chr5:124238400-124241600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr5:124238400-124241600 Weak transcription Duodenum Smooth Muscle Duodenum
15 chr5:124238400-124241600 Weak transcription Fetal Stomach stomach
16 chr5:124238400-124241800 Weak transcription Adipose Nuclei Adipose
17 chr5:124238400-124242000 Weak transcription Fetal Intestine Small intestine
18 chr5:124238400-124242000 Weak transcription Fetal Thymus thymus
19 chr5:124238400-124242000 Weak transcription Left Ventricle heart
20 chr5:124238400-124242000 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr5:124238400-124242000 Weak transcription Right Ventricle heart
22 chr5:124238400-124242000 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr5:124238400-124242000 Weak transcription HUVEC blood vessel
24 chr5:124238400-124242000 Weak transcription NHLF lung
25 chr5:124238400-124242200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr5:124238400-124242200 Weak transcription Esophagus oesophagus
27 chr5:124238400-124242200 Weak transcription Pancreas Pancrea
28 chr5:124238400-124242200 Weak transcription Psoas Muscle Psoas
29 chr5:124238400-124242200 Weak transcription Right Atrium heart
30 chr5:124238400-124246200 Weak transcription Aorta Aorta
31 chr5:124238600-124241200 Weak transcription Brain Cingulate Gyrus brain
32 chr5:124238600-124241400 Weak transcription Duodenum Mucosa Duodenum
33 chr5:124238600-124241600 Weak transcription Fetal Muscle Leg muscle
34 chr5:124238600-124241600 Weak transcription HSMMtube muscle
35 chr5:124238600-124241800 Weak transcription Fetal Lung lung
36 chr5:124238600-124241800 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr5:124238600-124242000 Weak transcription Fetal Intestine Large intestine
38 chr5:124238600-124242000 Weak transcription Small Intestine intestine
39 chr5:124238600-124242000 Weak transcription Spleen Spleen
40 chr5:124238600-124242000 Weak transcription NH-A brain
41 chr5:124238600-124242200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
42 chr5:124238600-124242400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr5:124238800-124241200 Weak transcription Pancreatic Islets Pancreatic Islet
44 chr5:124238800-124241600 Weak transcription Primary hematopoietic stem cells blood
45 chr5:124238800-124241600 Weak transcription Fetal Adrenal Gland Adrenal Gland
46 chr5:124238800-124241800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
47 chr5:124238800-124242000 Weak transcription Stomach Mucosa stomach
48 chr5:124239000-124241400 Weak transcription Primary hematopoietic stem cells short term culture blood
49 chr5:124239400-124241800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
50 chr5:124239400-124241800 Weak transcription Monocytes-CD14+_RO01746 blood

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Last update: Aug 31, 2015