Variant report

Variant	rs2044863
Chromosome Location	chr11:83484479-83484480
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 67 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:67)

rs_ID	r²[population]
rs1037353	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs10501546	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs10501548	0.90[JPT][hapmap]
rs10792692	0.82[JPT][hapmap]
rs10898150	0.82[JPT][hapmap]
rs10898152	0.82[JPT][hapmap]
rs11233711	0.82[JPT][hapmap]
rs11233730	0.82[JPT][hapmap]
rs11233741	0.90[CHB][hapmap];0.90[JPT][hapmap];0.83[ASN][1000 genomes]
rs11233751	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs1155310	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.82[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs1155313	0.82[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs1155508	0.90[CHB][hapmap];0.90[JPT][hapmap]
rs11605382	0.82[JPT][hapmap]
rs11605642	0.90[JPT][hapmap];0.83[ASN][1000 genomes]
rs12223210	0.82[JPT][hapmap]
rs12273815	0.80[JPT][hapmap]
rs12285846	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12290852	1.00[CHB][hapmap];1.00[JPT][hapmap];0.85[YRI][hapmap];0.82[ASN][1000 genomes]
rs13377566	0.90[CHB][hapmap];0.90[JPT][hapmap]
rs17146036	0.90[JPT][hapmap];0.83[ASN][1000 genomes]
rs17482520	0.85[ASN][1000 genomes]
rs17482676	0.83[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.91[ASN][1000 genomes]
rs17548333	0.90[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]
rs17548479	0.90[JPT][hapmap]
rs17548584	0.90[JPT][hapmap]
rs1945309	0.81[CHB][hapmap];0.82[JPT][hapmap]
rs2040307	0.86[ASN][1000 genomes]
rs2044864	0.86[ASN][1000 genomes]
rs57450388	0.85[ASN][1000 genomes]
rs6592139	0.90[CHB][hapmap];0.90[JPT][hapmap];0.84[ASN][1000 genomes]
rs66509934	0.86[ASN][1000 genomes]
rs66671165	0.86[ASN][1000 genomes]
rs66685127	0.90[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs66768024	0.86[ASN][1000 genomes]
rs67816311	0.80[AFR][1000 genomes];0.87[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs7101642	0.82[JPT][hapmap]
rs7104950	0.90[CHB][hapmap];0.82[JPT][hapmap]
rs7109065	0.83[CEU][hapmap];0.90[CHB][hapmap];0.90[JPT][hapmap]
rs7109609	0.90[CHB][hapmap];0.90[JPT][hapmap];0.84[ASN][1000 genomes]
rs7111226	0.90[CHB][hapmap];0.82[JPT][hapmap]
rs7116090	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7116773	0.86[ASN][1000 genomes]
rs7118583	0.89[CHB][hapmap];1.00[JPT][hapmap]
rs7119106	0.90[CHB][hapmap];0.90[JPT][hapmap]
rs7126086	0.80[CEU][hapmap];0.90[JPT][hapmap];0.84[ASN][1000 genomes]
rs7126807	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7127293	0.84[CEU][hapmap]
rs7130838	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs716865	0.82[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs72954544	0.86[ASN][1000 genomes]
rs72954570	0.86[ASN][1000 genomes]
rs72954588	0.90[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs72954590	0.87[AMR][1000 genomes];0.91[ASN][1000 genomes]
rs7342211	0.90[CHB][hapmap];0.90[JPT][hapmap]
rs7342212	0.81[ASN][1000 genomes]
rs73511043	0.81[AMR][1000 genomes]
rs7926247	0.82[JPT][hapmap]
rs7926468	1.00[CHB][hapmap];0.90[JPT][hapmap]
rs7927526	0.80[CEU][hapmap];0.90[CHB][hapmap];0.90[JPT][hapmap];0.84[ASN][1000 genomes]
rs7931558	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7937214	0.88[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs7943895	0.87[CEU][hapmap];1.00[CHB][hapmap];0.89[JPT][hapmap]
rs7945102	0.89[CHB][hapmap];0.82[JPT][hapmap]
rs7946060	0.82[JPT][hapmap]
rs7948831	0.90[CHB][hapmap];0.82[JPT][hapmap]
rs921452	0.90[CHB][hapmap];1.00[JPT][hapmap];0.86[ASN][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:83479800-83485200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr11:83481200-83485200	Weak transcription	Brain Anterior Caudate	brain
3	chr11:83482200-83489400	Weak transcription	Brain Hippocampus Middle	brain
4	chr11:83482600-83485000	Weak transcription	Brain Angular Gyrus	brain
5	chr11:83482600-83487400	Weak transcription	Brain Cingulate Gyrus	brain
6	chr11:83482800-83485800	Weak transcription	Brain Substantia Nigra	brain
7	chr11:83482800-83487400	Weak transcription	Brain Inferior Temporal Lobe	brain
8	chr11:83484200-83485000	Enhancers	Hela-S3	cervix

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