The 2.0 version of rSNPBase

Variant report

Variant rs2474697
Chromosome Location chr1:169950150-169950151
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:169904000-170010400 Weak transcription Aorta Aorta
2 chr1:169911800-169951200 Weak transcription Brain Hippocampus Middle brain
3 chr1:169911800-169968400 Weak transcription Psoas Muscle Psoas
4 chr1:169912000-169953600 Weak transcription Rectal Smooth Muscle rectum
5 chr1:169912000-169966000 Weak transcription Fetal Adrenal Gland Adrenal Gland
6 chr1:169912000-169968600 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr1:169912400-169950400 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr1:169912800-169967200 Weak transcription NHDF-Ad bronchial
9 chr1:169913400-169953600 Weak transcription Primary B cells from peripheral blood blood
10 chr1:169913800-169968400 Weak transcription Skeletal Muscle Male skeletal muscle
11 chr1:169914000-169968400 Weak transcription Ovary ovary
12 chr1:169914600-169961800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
13 chr1:169914600-169968000 Weak transcription Fetal Stomach stomach
14 chr1:169914800-169984000 Weak transcription Left Ventricle heart
15 chr1:169914800-169984800 Weak transcription Primary T helper naive cells fromperipheralblood blood
16 chr1:169914800-169988800 Weak transcription Fetal Intestine Small intestine
17 chr1:169915200-169950800 Weak transcription Fetal Lung lung
18 chr1:169917200-169950800 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr1:169921600-169968400 Weak transcription Fetal Brain Male brain
20 chr1:169922000-169984000 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr1:169922200-169968400 Weak transcription Brain Angular Gyrus brain
22 chr1:169922400-169996400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
23 chr1:169923600-169950400 Weak transcription Liver Liver
24 chr1:169923800-169950800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr1:169927600-169951600 Weak transcription Fetal Intestine Large intestine
26 chr1:169930400-169968400 Weak transcription Small Intestine intestine
27 chr1:169930800-169954200 Weak transcription Colon Smooth Muscle Colon
28 chr1:169934800-169952800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
29 chr1:169935400-169954200 Weak transcription Fetal Heart heart
30 chr1:169935600-169968400 Weak transcription Fetal Kidney kidney
31 chr1:169937600-169956600 Weak transcription Pancreas Pancrea
32 chr1:169938000-169968400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
33 chr1:169938200-169952200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr1:169938200-169965400 Weak transcription Duodenum Mucosa Duodenum
35 chr1:169938600-169953400 Weak transcription Right Ventricle heart
36 chr1:169938800-169962200 Weak transcription Esophagus oesophagus
37 chr1:169939000-169968400 Weak transcription Brain Inferior Temporal Lobe brain
38 chr1:169939200-169967400 Weak transcription Osteobl bone
39 chr1:169939600-169950400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr1:169942000-169953400 Weak transcription Placenta Amnion Placenta Amnion
41 chr1:169944400-169952000 Weak transcription Fetal Thymus thymus
42 chr1:169944800-169954600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
43 chr1:169944800-169968000 Weak transcription Brain Substantia Nigra brain
44 chr1:169944800-169989600 Weak transcription Thymus Thymus
45 chr1:169945000-169951200 Weak transcription Placenta Placenta
46 chr1:169945000-169953800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
47 chr1:169945200-169952400 Weak transcription Brain Germinal Matrix brain
48 chr1:169945200-169953000 Weak transcription Monocytes-CD14+_RO01746 blood
49 chr1:169945400-169951200 Weak transcription HUES48 Cell Line embryonic stem cell
50 chr1:169945400-169968400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung

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Last update: Aug 31, 2015