Variant report

Variant	rs16862968
Chromosome Location	chr1:170002561-170002562
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:170001773..170004405-chr1:170006307..170009293,2	K562	blood:

Extended variants
information (count: 268 )
Associated
traits (count: 23 )

rSNPs within LD-proxies of this variant (count:266)

rs_ID	r²[population]
rs1046058	1.00[CEU][hapmap]
rs10489173	1.00[CEU][hapmap];0.89[TSI][hapmap]
rs10494479	1.00[CEU][hapmap];1.00[MEX][hapmap];0.89[TSI][hapmap];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10800489	0.88[EUR][1000 genomes]
rs12116601	0.83[EUR][1000 genomes]
rs12118080	0.88[EUR][1000 genomes]
rs12118305	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12118739	0.83[CEU][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12119299	1.00[CEU][hapmap];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12119368	1.00[CEU][hapmap]
rs12119447	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12119635	1.00[CEU][hapmap]
rs12119665	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12120229	1.00[CEU][hapmap];1.00[MEX][hapmap];0.89[TSI][hapmap];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12121045	1.00[CEU][hapmap];0.89[TSI][hapmap];0.83[EUR][1000 genomes]
rs12121371	0.83[CEU][hapmap];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12121381	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12121451	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12121614	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs12121797	1.00[CEU][hapmap];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12122419	1.00[CEU][hapmap]
rs12122606	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12122720	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12122885	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12123432	1.00[CEU][hapmap]
rs12123686	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12123806	0.83[EUR][1000 genomes]
rs12123835	0.83[EUR][1000 genomes]
rs12123865	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12124032	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs12124384	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12124561	1.00[CEU][hapmap];0.89[TSI][hapmap];0.83[EUR][1000 genomes]
rs12124750	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs12124907	1.00[CEU][hapmap];1.00[MEX][hapmap];0.89[TSI][hapmap];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12125595	1.00[CEU][hapmap];1.00[TSI][hapmap];0.87[EUR][1000 genomes]
rs12125679	1.00[CEU][hapmap];1.00[TSI][hapmap];0.87[EUR][1000 genomes]
rs12126591	1.00[CEU][hapmap]
rs12127120	1.00[CEU][hapmap];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12127174	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12127211	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs12127500	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs12127911	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12128126	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12128308	1.00[CEU][hapmap];0.89[TSI][hapmap];0.83[EUR][1000 genomes]
rs12128929	1.00[CEU][hapmap]
rs12129052	0.87[EUR][1000 genomes]
rs12129164	0.83[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs12129951	0.88[EUR][1000 genomes]
rs12130150	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12130263	0.87[EUR][1000 genomes]
rs12130417	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12130472	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12130561	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12131192	1.00[CEU][hapmap];1.00[TSI][hapmap];0.87[EUR][1000 genomes]
rs12131206	0.91[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12131357	1.00[CEU][hapmap];0.83[TSI][hapmap];0.83[EUR][1000 genomes]
rs12131603	1.00[CEU][hapmap];1.00[MEX][hapmap];0.89[TSI][hapmap];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12132173	1.00[CEU][hapmap];1.00[MEX][hapmap];0.89[TSI][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12132384	1.00[CEU][hapmap];0.89[TSI][hapmap]
rs12132892	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12133074	1.00[CEU][hapmap];0.89[TSI][hapmap]
rs12133108	0.88[EUR][1000 genomes]
rs12133115	1.00[CEU][hapmap];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12133172	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12133369	0.88[EUR][1000 genomes]
rs12133849	0.84[EUR][1000 genomes]
rs12134837	1.00[CEU][hapmap]
rs12134886	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs12135355	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12135436	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs12135642	1.00[CEU][hapmap]
rs12135726	1.00[CEU][hapmap];0.89[TSI][hapmap]
rs12136425	1.00[CEU][hapmap];0.89[TSI][hapmap]
rs12136554	1.00[CEU][hapmap];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12137279	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12137423	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12137487	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12137873	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12138083	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12139141	1.00[CEU][hapmap];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12139629	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12140134	0.83[EUR][1000 genomes]
rs12140984	0.88[EUR][1000 genomes]
rs12141317	1.00[CEU][hapmap]
rs12141377	1.00[CEU][hapmap];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12141428	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12141613	1.00[CEU][hapmap];1.00[MEX][hapmap];0.89[TSI][hapmap];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12141680	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12142093	1.00[CEU][hapmap];0.89[TSI][hapmap]
rs12142355	0.83[EUR][1000 genomes]
rs12142459	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12142959	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12142961	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12143057	1.00[CEU][hapmap];0.89[TSI][hapmap]
rs12143204	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12143260	0.83[CEU][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12143301	1.00[CEU][hapmap]
rs12143781	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12144122	0.83[EUR][1000 genomes]
rs12144207	1.00[CEU][hapmap]
rs12144599	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs12144624	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs12144683	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs12145295	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12145458	1.00[CEU][hapmap]
rs12145562	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12145614	1.00[CEU][hapmap];1.00[MEX][hapmap];0.89[TSI][hapmap];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs12145705	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs12146043	0.83[EUR][1000 genomes]
rs1321657	1.00[CEU][hapmap];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs16828222	1.00[CEU][hapmap];1.00[TSI][hapmap];0.87[EUR][1000 genomes]
rs16862751	0.91[CEU][hapmap];0.87[EUR][1000 genomes]
rs16862919	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];1.00[TSI][hapmap];0.80[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16862956	1.00[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17345663	1.00[CEU][hapmap];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs17349733	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17349740	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs17529791	1.00[CEU][hapmap]
rs17543370	1.00[CEU][hapmap];0.89[TSI][hapmap]
rs17543611	1.00[CEU][hapmap];0.89[TSI][hapmap]
rs17543730	1.00[CEU][hapmap]
rs17544586	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs17544823	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs17602051	1.00[CEU][hapmap]
rs17602072	1.00[CEU][hapmap]
rs17602701	1.00[CEU][hapmap];0.89[TSI][hapmap]
rs17603570	1.00[CEU][hapmap];0.83[EUR][1000 genomes]
rs17603666	1.00[CEU][hapmap];0.89[TSI][hapmap];0.83[EUR][1000 genomes]
rs2057249	1.00[CEU][hapmap];1.00[MEX][hapmap];0.89[TSI][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2093050	0.88[EUR][1000 genomes]
rs2145046	0.88[EUR][1000 genomes]
rs2183418	0.91[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2272919	1.00[CEU][hapmap]
rs2421109	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2421110	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs2474697	0.91[EUR][1000 genomes]
rs2474698	1.00[CEU][hapmap];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs2474701	0.80[EUR][1000 genomes]
rs2474704	0.84[EUR][1000 genomes]
rs2474705	0.85[EUR][1000 genomes]
rs2474706	0.86[EUR][1000 genomes]
rs2750018	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs2750019	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs2806384	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs2806385	0.89[CEU][hapmap];0.88[EUR][1000 genomes]
rs2806387	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs2806389	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs2806390	0.88[EUR][1000 genomes]
rs2806392	1.00[CEU][hapmap];0.81[LWK][hapmap];0.95[TSI][hapmap];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs28418890	0.80[ASN][1000 genomes]
rs28652825	0.83[EUR][1000 genomes]
rs3766143	1.00[CEU][hapmap]
rs3766152	0.83[EUR][1000 genomes]
rs4385776	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs4519	1.00[CEU][hapmap];0.89[TSI][hapmap];0.88[EUR][1000 genomes]
rs476485	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs478116	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs483103	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs486431	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs490469	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs490776	0.83[CEU][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs495092	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs495642	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs505336	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs506196	1.00[CEU][hapmap];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs510681	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs511443	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs511609	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs517649	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs518928	0.88[EUR][1000 genomes]
rs520990	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs521165	0.90[EUR][1000 genomes]
rs522017	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs536080	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs536358	1.00[CEU][hapmap];0.90[EUR][1000 genomes]
rs536834	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs537976	0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs541711	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs544008	1.00[CEU][hapmap];0.89[TSI][hapmap];0.88[EUR][1000 genomes]
rs545284	0.85[EUR][1000 genomes]
rs545954	1.00[CEU][hapmap];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs545963	1.00[CEU][hapmap];1.00[MEX][hapmap];0.83[TSI][hapmap];0.90[EUR][1000 genomes]
rs549537	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs553209	0.88[EUR][1000 genomes]
rs554060	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs557475	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs558540	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs558782	0.88[EUR][1000 genomes]
rs559969	0.90[EUR][1000 genomes]
rs560414	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs562054	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs562837	1.00[CEU][hapmap];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs565397	1.00[CEU][hapmap];0.89[TSI][hapmap];0.88[EUR][1000 genomes]
rs565626	1.00[CEU][hapmap];0.80[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs571806	0.84[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs575147	1.00[CEU][hapmap];0.89[TSI][hapmap];0.88[EUR][1000 genomes]
rs576225	0.90[CEU][hapmap];0.88[EUR][1000 genomes]
rs578916	1.00[CEU][hapmap];0.90[EUR][1000 genomes]
rs57952001	0.87[EUR][1000 genomes]
rs579553	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs582900	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs583604	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes]
rs590181	1.00[CEU][hapmap];0.89[TSI][hapmap];0.88[EUR][1000 genomes]
rs591202	0.88[EUR][1000 genomes]
rs591559	0.88[EUR][1000 genomes]
rs593406	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs595984	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs598763	0.88[EUR][1000 genomes]
rs601355	1.00[CEU][hapmap];0.89[TSI][hapmap];0.88[EUR][1000 genomes]
rs602556	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs606047	0.88[EUR][1000 genomes]
rs606409	0.88[EUR][1000 genomes]
rs606689	1.00[CEU][hapmap];0.87[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs606695	0.83[CEU][hapmap];0.93[EUR][1000 genomes]
rs607707	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs612548	1.00[CEU][hapmap];0.85[EUR][1000 genomes]
rs615485	0.88[EUR][1000 genomes]
rs615915	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs616789	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs618149	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs618692	0.83[CEU][hapmap]
rs629408	1.00[CEU][hapmap];0.89[TSI][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs629421	1.00[CEU][hapmap];1.00[MEX][hapmap];0.89[TSI][hapmap];0.91[EUR][1000 genomes]
rs629593	0.84[EUR][1000 genomes]
rs630179	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs638486	1.00[CEU][hapmap];1.00[MEX][hapmap];0.89[TSI][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs642352	0.88[EUR][1000 genomes]
rs6427231	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs644834	1.00[CEU][hapmap];0.90[EUR][1000 genomes]
rs646730	0.92[EUR][1000 genomes]
rs647113	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs648502	0.90[EUR][1000 genomes]
rs654664	1.00[CEU][hapmap];1.00[MEX][hapmap];0.83[TSI][hapmap];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs655133	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs655474	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs656334	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs656848	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs657254	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs659363	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs661516	0.93[EUR][1000 genomes]
rs664598	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs664962	1.00[CEU][hapmap];0.89[TSI][hapmap];0.88[EUR][1000 genomes]
rs665774	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6671989	0.93[ASN][1000 genomes]
rs6681685	0.87[EUR][1000 genomes]
rs6685386	0.93[ASN][1000 genomes]
rs671921	0.90[CEU][hapmap];0.88[EUR][1000 genomes]
rs672843	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs673280	0.87[EUR][1000 genomes]
rs673656	0.91[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs673789	1.00[CEU][hapmap];0.89[TSI][hapmap];0.88[EUR][1000 genomes]
rs674896	1.00[CEU][hapmap];0.90[EUR][1000 genomes]
rs675394	1.00[CEU][hapmap];0.87[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs676020	1.00[CEU][hapmap];0.88[EUR][1000 genomes]
rs677630	0.90[EUR][1000 genomes]
rs680269	1.00[CEU][hapmap];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs685155	1.00[CEU][hapmap];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs686519	1.00[CEU][hapmap];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs686911	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs687195	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs7411424	0.83[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs74122419	0.83[EUR][1000 genomes]
rs7549000	0.91[CEU][hapmap];0.90[EUR][1000 genomes]
rs850771	1.00[CEU][hapmap];0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs9426888	0.83[AMR][1000 genomes];0.96[EUR][1000 genomes]
rs9645329	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1014033	chr1:169968488-170453021	Flanking Active TSS Enhancers Active TSS Weak transcription Strong transcription ZNF genes & repeats Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	18 gene(s)	inside rSNPs	diseases
2	nsv535200	chr1:169968488-170453021	Weak transcription Flanking Active TSS Strong transcription Active TSS Enhancers ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA	18 gene(s)	inside rSNPs	diseases

mRNA abundance (count:23)

SNP	Gene	Cis/trans	Tissue	Source
rs16862968	METTL18	cis	lung	GTEx
rs16862968	METTL18	cis	Adipose Subcutaneous	GTEx
rs16862968	C1orf156	cis	parietal	SCAN
rs16862968	METTL18	cis	Nerve Tibial	GTEx
rs16862968	METTL18	cis	Muscle Skeletal	GTEx
rs16862968	C1orf112	cis	multi-tissue	Pritchard
rs16862968	METTL18	cis	Esophagus Muscularis	GTEx
rs16862968	POGK	cis	cerebellum	SCAN
rs16862968	C1orf156	cis	uninvolved skin	skin_eQTL
rs16862968	KIFAP3	cis	parietal	SCAN
rs16862968	METTL18	cis	Heart Left Ventricle	GTEx
rs16862968	C1orf156	Cis_1M	lymphoblastoid	RTeQTL
rs16862968	METTL18	cis	Artery Tibial	GTEx
rs16862968	METTL18	cis	Artery Aorta	GTEx
rs16862968	METTL18	cis	Thyroid	GTEx
rs16862968	C1orf156	cis	multi-tissue	Pritchard
rs16862968	C1orf112	cis	cerebellum	SCAN
rs16862968	SFT2D2	cis	cerebellum	SCAN
rs16862968	C1orf156	cis	cerebellum	SCAN
rs16862968	METTL18	cis	Esophagus Mucosa	GTEx
rs16862968	C1orf156	cis	lesional skin	skin_eQTL
rs16862968	C1orf156	cis	lymphoblastoid	seeQTL
rs16862968	MGC9084	cis	multi-tissue	Pritchard

Chromatin state (count:81 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:169904000-170010400	Weak transcription	Aorta	Aorta
2	chr1:169951600-170011800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
3	chr1:169952000-170018000	Weak transcription	Primary T helper 17 cells PMA-I stimulated	--
4	chr1:169952400-170043000	Weak transcription	Skeletal Muscle Female	skeletal muscle
5	chr1:169967600-170013000	Weak transcription	Fetal Heart	heart
6	chr1:169968800-170010800	Weak transcription	Colon Smooth Muscle	Colon
7	chr1:169968800-170020200	Weak transcription	Brain Angular Gyrus	brain
8	chr1:169969000-170012600	Weak transcription	Brain Inferior Temporal Lobe	brain
9	chr1:169969600-170017800	Weak transcription	Esophagus	oesophagus
10	chr1:169979400-170018000	Weak transcription	Brain Cingulate Gyrus	brain
11	chr1:169979800-170015200	Weak transcription	HMEC	breast
12	chr1:169980000-170006600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
13	chr1:169981600-170013400	Weak transcription	Lung	lung
14	chr1:169982400-170020600	Weak transcription	Rectal Smooth Muscle	rectum
15	chr1:169983000-170017200	Weak transcription	HSMMtube	muscle
16	chr1:169983800-170017600	Weak transcription	Spleen	Spleen
17	chr1:169984600-170020800	Weak transcription	Gastric	stomach
18	chr1:169984800-170027600	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
19	chr1:169985000-170010800	Weak transcription	Brain Hippocampus Middle	brain
20	chr1:169985000-170012800	Weak transcription	Brain Anterior Caudate	brain
21	chr1:169985200-170020400	Weak transcription	Primary T killer memory cells from peripheral blood	blood
22	chr1:169985800-170003000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
23	chr1:169985800-170010800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
24	chr1:169985800-170010800	Weak transcription	Rectal Mucosa Donor 29	rectum
25	chr1:169986200-170006600	Weak transcription	Ovary	ovary
26	chr1:169986200-170010600	Weak transcription	Stomach Smooth Muscle	stomach
27	chr1:169986400-170013600	Weak transcription	Left Ventricle	heart
28	chr1:169986400-170019800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
29	chr1:169988000-170017600	Weak transcription	Fetal Lung	lung
30	chr1:169989200-170006400	Weak transcription	Rectal Mucosa Donor 31	rectum
31	chr1:169989600-170019800	Weak transcription	Right Ventricle	heart
32	chr1:169989800-170013400	Weak transcription	Psoas Muscle	Psoas
33	chr1:169990000-170004400	Weak transcription	Dnd41	blood
34	chr1:169990400-170017200	Weak transcription	Fetal Kidney	kidney
35	chr1:169993600-170010800	Weak transcription	Sigmoid Colon	Sigmoid Colon
36	chr1:169993600-170021400	Weak transcription	Fetal Brain Male	brain
37	chr1:169993800-170003000	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
38	chr1:169995400-170017800	Weak transcription	Pancreas	Pancrea
39	chr1:169995800-170006200	Weak transcription	Liver	Liver
40	chr1:169996800-170010000	Weak transcription	Brain Germinal Matrix	brain
41	chr1:169997200-170006200	Weak transcription	Adipose Nuclei	Adipose
42	chr1:169997200-170006200	Weak transcription	Duodenum Smooth Muscle	Duodenum
43	chr1:169997200-170010600	Weak transcription	Primary B cells from peripheral blood	blood
44	chr1:169997200-170010800	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
45	chr1:169997200-170012400	Weak transcription	Duodenum Mucosa	Duodenum
46	chr1:169997400-170012000	Weak transcription	Primary B cells from cord blood	blood
47	chr1:169997800-170010000	Weak transcription	Fetal Stomach	stomach
48	chr1:169997800-170010600	Weak transcription	Fetal Thymus	thymus
49	chr1:169997800-170017600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
50	chr1:169997800-170018600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived

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