The 2.0 version of rSNPBase

Variant report

Variant rs12145705
Chromosome Location chr1:169985192-169985193
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:169904000-170010400 Weak transcription Aorta Aorta
2 chr1:169914800-169988800 Weak transcription Fetal Intestine Small intestine
3 chr1:169922400-169996400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr1:169944800-169989600 Weak transcription Thymus Thymus
5 chr1:169951600-170011800 Weak transcription Primary T helper naive cells from peripheral blood blood
6 chr1:169952000-169985200 Weak transcription Rectal Mucosa Donor 29 rectum
7 chr1:169952000-170018000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
8 chr1:169952400-170043000 Weak transcription Skeletal Muscle Female skeletal muscle
9 chr1:169956800-169997400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
10 chr1:169967600-170013000 Weak transcription Fetal Heart heart
11 chr1:169968800-169999400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr1:169968800-170010800 Weak transcription Colon Smooth Muscle Colon
13 chr1:169968800-170020200 Weak transcription Brain Angular Gyrus brain
14 chr1:169969000-169997400 Weak transcription Fetal Stomach stomach
15 chr1:169969000-170012600 Weak transcription Brain Inferior Temporal Lobe brain
16 chr1:169969200-169988800 Weak transcription Fetal Muscle Leg muscle
17 chr1:169969600-170017800 Weak transcription Esophagus oesophagus
18 chr1:169971400-169996400 Weak transcription NHDF-Ad bronchial
19 chr1:169976600-169989600 Weak transcription Brain Germinal Matrix brain
20 chr1:169979400-169995800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr1:169979400-170018000 Weak transcription Brain Cingulate Gyrus brain
22 chr1:169979600-169987800 Weak transcription HSMM muscle
23 chr1:169979800-170015200 Weak transcription HMEC breast
24 chr1:169980000-170006600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
25 chr1:169980200-169989400 Weak transcription Fetal Kidney kidney
26 chr1:169980400-169989200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr1:169980600-169997400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr1:169981400-169986200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
29 chr1:169981600-170013400 Weak transcription Lung lung
30 chr1:169982000-169986200 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
31 chr1:169982000-169987000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr1:169982200-169986200 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
33 chr1:169982200-169986200 Strong transcription Primary T cells from cord blood blood
34 chr1:169982400-170020600 Weak transcription Rectal Smooth Muscle rectum
35 chr1:169982800-169985200 Strong transcription Primary B cells from cord blood blood
36 chr1:169982800-169985600 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
37 chr1:169982800-169986200 Strong transcription Adipose Nuclei Adipose
38 chr1:169982800-169994000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
39 chr1:169983000-169985200 Strong transcription Primary T killer memory cells from peripheral blood blood
40 chr1:169983000-169985800 Strong transcription Fetal Muscle Trunk muscle
41 chr1:169983000-169986400 Strong transcription Primary T regulatory cells fromperipheralblood blood
42 chr1:169983000-170017200 Weak transcription HSMMtube muscle
43 chr1:169983200-169985800 Strong transcription Primary T cells fromperipheralblood blood
44 chr1:169983400-169995400 Weak transcription Monocytes-CD14+_RO01746 blood
45 chr1:169983400-169996000 Weak transcription Primary monocytes fromperipheralblood blood
46 chr1:169983600-169985400 Weak transcription Rectal Mucosa Donor 31 rectum
47 chr1:169983800-169989400 Weak transcription Right Ventricle heart
48 chr1:169983800-170017600 Weak transcription Spleen Spleen
49 chr1:169984000-169985800 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
50 chr1:169984000-169986200 Strong transcription Duodenum Mucosa Duodenum

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Last update: Aug 31, 2015